| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 491,019 | T→C | 5.6% | T469A (ACC→GCC) | lptD ← | LPS‑assembly protein LptD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 491,019 | 0 | T | C | 5.6% | 504.6 / 11.8 | 159 | T469A (ACC→GCC) | lptD | LPS‑assembly protein LptD |
| Reads supporting (aligned to +/- strand): ref base T (68/81); new base C (5/4); total (74/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.12e-01 | |||||||||||
Only 100 of 161 total aligned reads displayed.
TCATCAAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCG > NC_002947/490871‑491167 | tcatcaAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCTGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTc < 1:3065297/150‑1 (MQ=255)tcatcaAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTc < 1:1510593/150‑1 (MQ=255) atcaAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGc > 1:4066397/1‑150 (MQ=255) atcaAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGc > 2:2143767/1‑150 (MQ=255) tcaAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGcc > 2:28501/1‑150 (MQ=255) tcaAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGcc > 1:2289344/1‑150 (MQ=255) aaGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGGCGCCAtc > 2:4830415/1‑150 (MQ=255) gACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCAtctc < 2:3184515/150‑1 (MQ=255) gACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCAtctc < 2:3184457/150‑1 (MQ=255) ggCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCCGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTa < 1:28501/150‑1 (MQ=255) ggCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTACGAGATGGCGACCATCTCgca < 2:1724988/150‑3 (MQ=255) gCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAg < 2:1915807/150‑1 (MQ=255) tGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCAt < 2:889364/150‑1 (MQ=255) tCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGc < 1:4778793/150‑1 (MQ=255) gATCACGATCAAAGCGAAGAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGTACGGCAGCGTAGCGTTCAGGGTGAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCGTGCAGATTCa > 2:3273682/1‑150 (MQ=255) aTCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCaa < 2:242857/150‑1 (MQ=255) cACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAAcc > 2:1118096/1‑150 (MQ=255) gATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTc < 2:2018048/143‑1 (MQ=255) gATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTc > 1:2018048/1‑143 (MQ=255) gATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACcgcg > 2:3317040/1‑150 (MQ=255) gATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACcgcg > 1:4331627/1‑150 (MQ=255) aTCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACcgcgc < 2:3739723/150‑1 (MQ=255) aTCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACcgcgc > 1:3735455/1‑150 (MQ=255) tCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTa > 1:3326543/1‑128 (MQ=255) aaGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGgtg > 1:3639651/1‑150 (MQ=255) aaGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGgtg > 1:3639656/1‑150 (MQ=255) gCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTa < 1:2820222/150‑1 (MQ=255) aCAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTg > 2:334324/1‑150 (MQ=255) ttCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACCTTCAACCGCGCGGTGTAGCTGTCGcc > 2:3533384/1‑150 (MQ=255) ttCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGcc > 1:4188603/1‑150 (MQ=255) ttCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGcc > 1:4468624/1‑150 (MQ=255) ttCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGcc > 2:484644/1‑150 (MQ=255) tCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCt < 2:2805974/150‑1 (MQ=255) cAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTc < 2:4937728/150‑1 (MQ=255) cAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTc < 2:2203623/150‑1 (MQ=255) cAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTc < 1:2280526/150‑1 (MQ=255) ctcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTa < 2:1319762/150‑1 (MQ=255) ctcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGGAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTa < 2:4431014/150‑1 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTc > 2:4399082/1‑96 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTc < 1:4399082/96‑1 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAg > 1:236431/1‑150 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAg > 2:4545897/1‑150 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAg > 1:5309753/1‑150 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAg < 1:2044575/150‑1 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAg < 2:1838607/150‑1 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAg < 1:2955784/150‑1 (MQ=255) cGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAgg > 2:4811151/1‑150 (MQ=255) cccAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCaa > 2:4011963/1‑150 (MQ=255) cccAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCaa > 1:568280/1‑150 (MQ=255) ccAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAAc > 1:2957560/1‑150 (MQ=255) ccAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAAc < 1:276834/150‑1 (MQ=255) cAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACg > 1:4183594/1‑150 (MQ=255) gTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCAcc < 1:496528/150‑1 (MQ=255) gTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCAcc > 2:3818003/1‑150 (MQ=255) aaaCCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCctgc > 2:2531443/1‑150 (MQ=255) aaCCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCGGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTCGGCCTGCACATTCAACCGCGCGGTGTAGCTGTCGCGGCGGTAGGTCAACGCACCctgct > 2:4257617/1‑150 (MQ=255) aCCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCctgctg < 1:3614318/150‑1 (MQ=255) ccGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTgg < 2:2957560/150‑1 (MQ=255) cGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGt < 2:5083258/150‑1 (MQ=255) ccAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTc < 1:334324/150‑1 (MQ=255) cAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTca > 1:3046606/1‑150 (MQ=255) aGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcag > 1:691490/1‑150 (MQ=255) ggCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCctgctgaaccagc < 2:2202051/150‑8 (MQ=255) gCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcagca < 2:117415/150‑1 (MQ=255) gCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcagca < 2:4529899/150‑1 (MQ=255) tGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAgg < 2:3585371/150‑1 (MQ=255) tGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGAACCAGCAgg < 2:474155/150‑1 (MQ=255) cGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTc < 1:1074983/150‑1 (MQ=255) cAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAAt < 2:5309753/150‑1 (MQ=255) ggTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTg < 2:5031564/150‑1 (MQ=255) ggTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGGAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTg < 1:2551933/150‑1 (MQ=255) gTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTgg < 2:1644451/150‑1 (MQ=255) cAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGTGTTGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTc < 2:3347198/150‑1 (MQ=255) cAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTc < 2:3258916/150‑1 (MQ=255) cAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTc < 2:2124333/150‑1 (MQ=255) aGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCctgctgaacc > 2:679134/1‑113 (MQ=255) aGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCctgctgaacc < 1:679134/117‑5 (MQ=255) gCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCgg > 1:563465/1‑150 (MQ=255) tGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGAt > 1:5181340/1‑150 (MQ=255) tGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGAt > 1:5181350/1‑150 (MQ=255) cAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAg > 1:1311403/1‑150 (MQ=255) gCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTc > 1:2543913/1‑150 (MQ=255) gATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGAGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCt < 2:5089339/150‑1 (MQ=255) tCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTgg < 2:1497522/150‑1 (MQ=255) cATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGa > 1:507033/1‑150 (MQ=255) aTACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGaa < 2:3735455/150‑1 (MQ=255) tGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACg < 1:472728/150‑1 (MQ=255) tGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACg < 2:4602251/150‑1 (MQ=255) atgccTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCgg < 1:3191141/100‑1 (MQ=255) tacGAGATGGCGACCATCTCGCAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCg > 1:1866772/3‑150 (MQ=255) gCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAGCGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAActcccctg > 1:953027/1‑143 (MQ=255) acGAGATGGCGACCATCTCGCAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcagca < 1:1561212/89‑1 (MQ=255) cGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCt < 2:1341282/150‑1 (MQ=255) cGAGATGGTCGCCATCTCGTAGGCATGCACATACAACCGCGCGGTGTAGCCGTCGCCTCGGTAGGTCAACGCACCCAGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGAGTCCAGGTCCTGGAAGTAGAACGGGTCGCt < 2:2513719/150‑1 (MQ=255) agaTGGTCGCCATCTCGTAGGCATGTACATTCAACCGCGCGGGGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGa < 2:3367620/150‑1 (MQ=255) gaTGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGAt > 2:4883168/1‑150 (MQ=255) gTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCg > 1:4522130/1‑150 (MQ=255) gTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCg < 1:3818003/150‑1 (MQ=255) gTCGCCATCTCGTAGGCAGGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTGTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCg < 2:5003934/150‑1 (MQ=255) tCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTcc < 2:410014/95‑1 (MQ=255) | TCATCAAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCG > NC_002947/490871‑491167 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |