Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 491,020 | C→G | 5.8% | A468A (GCG→GCC) ‡ | lptD ← | LPS‑assembly protein LptD |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 491,020 | 0 | C | G | 5.8% | 520.8 / 16.2 | 156 | A468A (GCG→GCC) ‡ | lptD | LPS‑assembly protein LptD |
Reads supporting (aligned to +/- strand): ref base C (69/78); new base G (5/4); total (74/82) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.37e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01 |
Only 100 of 165 total aligned reads displayed.
TCATCAAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCGGT > NC_002947/490871‑491169 | tcatcaAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTc < 1:1510593/150‑1 (MQ=255) tcatcaAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTc < 1:3065351/150‑1 (MQ=255) atcaAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGc > 2:2143767/1‑150 (MQ=255) tcaAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGcc > 2:28386/1‑150 (MQ=255) tcaAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGcc > 1:2289344/1‑150 (MQ=255) gACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCAtctc < 2:3184515/150‑1 (MQ=255) ggCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCCGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTa < 1:28501/150‑1 (MQ=255) ggCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTa > 2:1030950/1‑150 (MQ=255) ggCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTa < 1:28386/150‑1 (MQ=255) ggCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTACGAGATGGCGACCATCTCgca < 2:1725005/150‑3 (MQ=255) gCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAg < 2:1915807/150‑1 (MQ=255) aCTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGc > 1:474155/1‑150 (MQ=255) tGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCAt < 2:889364/150‑1 (MQ=255) tGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGCGACCATCTCGCAgatca < 2:2182791/150‑5 (MQ=255) ccTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGca < 1:1928655/150‑1 (MQ=255) tCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACAt < 1:2118561/150‑1 (MQ=255) gATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCa > 2:3749780/1‑150 (MQ=255) aTCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCaa < 2:242857/150‑1 (MQ=255) aTCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCaa < 1:4255333/150‑1 (MQ=255) cGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACcgc < 1:3687778/150‑1 (MQ=255) gATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTc > 1:2018048/1‑143 (MQ=255) gATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACcgcg > 2:3317040/1‑150 (MQ=255) aTCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACcgcgc > 1:3735455/1‑150 (MQ=255) tCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTa > 1:3326543/1‑128 (MQ=255) aaGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGgtg > 1:536508/1‑150 (MQ=255) aaGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGgtg > 1:3639651/1‑150 (MQ=255) gCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTa < 2:30727/150‑1 (MQ=255) cGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAg > 1:5135669/1‑150 (MQ=255) aaCAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCt < 1:3521821/150‑1 (MQ=255) aCAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTg > 2:334324/1‑150 (MQ=255) ttCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACCTTCAACCGCGCGGTGTAGCTGTCGcc > 2:3533384/1‑150 (MQ=255) ttCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGcc > 2:484644/1‑150 (MQ=255) cAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTc < 2:2203623/150‑1 (MQ=255) cAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTc < 1:2280526/150‑1 (MQ=255) ctcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTa < 2:1319762/150‑1 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTc < 1:4399082/96‑1 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTc > 2:4399082/1‑96 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAg > 1:236431/1‑150 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAg < 1:2955784/150‑1 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAg > 2:4545897/1‑150 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAg > 1:5309753/1‑150 (MQ=255) cGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAgg > 2:4811151/1‑150 (MQ=255) cccAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCaa > 2:4011963/1‑150 (MQ=255) cccAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCaa > 1:568280/1‑150 (MQ=255) ccAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAAc < 1:276834/150‑1 (MQ=255) cAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACg > 1:4183594/1‑150 (MQ=255) aaGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCAtc < 1:3913124/94‑1 (MQ=255) aaGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGc > 1:2996441/1‑150 (MQ=255) aGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCa < 2:1934901/150‑1 (MQ=255) gTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCAcc > 2:3818003/1‑150 (MQ=255) gTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCAcc < 1:496528/150‑1 (MQ=255) ttCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCAccc > 2:4884322/1‑150 (MQ=255) aaaCCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCctgc > 2:2531443/1‑150 (MQ=255) aCCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCctgctg < 1:3614318/150‑1 (MQ=255) ccGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTgg < 2:2957560/150‑1 (MQ=255) cGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGt > 1:4501782/1‑150 (MQ=255) cGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGt < 2:5083258/150‑1 (MQ=255) cAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTca > 1:3046606/1‑150 (MQ=255) aGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcag > 1:691490/1‑150 (MQ=255) gCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcagca < 2:117415/150‑1 (MQ=255) gCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcagca < 2:2077742/150‑1 (MQ=255) tGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAgg < 2:3585371/150‑1 (MQ=255) ggAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGt > 1:17431/1‑150 (MQ=255) cGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTcgcg < 2:4501782/150‑1 (MQ=255) cGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTc < 1:1074983/150‑1 (MQ=255) cAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAAt < 2:5309753/150‑1 (MQ=255) ggTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCAccc < 2:1465859/112‑1 (MQ=255) ggTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCAccc > 1:1465859/1‑112 (MQ=255) ggTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTg < 2:5031564/150‑1 (MQ=255) ggTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGGAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTg < 1:2551933/150‑1 (MQ=255) gTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTgg < 2:1644451/150‑1 (MQ=255) cAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGTGTTGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTc < 2:3347198/150‑1 (MQ=255) cAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTc < 2:3258916/150‑1 (MQ=255) aGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCctgctgaacc > 2:679134/1‑113 (MQ=255) tGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGAt > 1:5181350/1‑150 (MQ=255) ggCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTcc < 2:243208/150‑1 (MQ=255) gCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCa < 2:3269963/150‑1 (MQ=255) cAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAg > 2:4821545/1‑150 (MQ=255) gCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTc > 1:2543913/1‑150 (MQ=255) gATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCt > 2:2653216/1‑150 (MQ=255) gATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGAGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCt < 2:5089339/150‑1 (MQ=255) aTCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTg > 1:4461945/1‑150 (MQ=255) cATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGa > 1:507033/1‑150 (MQ=255) aTACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGaa < 2:3735455/150‑1 (MQ=255) tGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACg < 1:472728/150‑1 (MQ=255) tGATCTGAGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACg < 1:3273682/150‑1 (MQ=255) aTCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACggg < 2:4601339/150‑1 (MQ=255) aTCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACggg < 2:4331627/150‑1 (MQ=255) tacGAGATGGCGACCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCg > 2:4252103/3‑150 (MQ=255) tGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCg > 1:671571/1‑150 (MQ=255) gCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAGCGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAActcccctg > 1:953027/1‑143 (MQ=255) acGAGATGGCGACCATCTCGCAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcagca > 2:1561212/2‑90 (MQ=255) agaTGGTCGCCATCTCGTAGGCATGTACATTCAACCGCGCGGGGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGa < 2:3367620/150‑1 (MQ=255) gaTGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGAt > 2:4883168/1‑150 (MQ=255) gTCGCCCTCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCg > 2:4716304/1‑150 (MQ=255) gTCGCCATCTCGTAGGCAGGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTGTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCg < 2:5003934/150‑1 (MQ=255) tCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTcc < 2:410014/95‑1 (MQ=255) tCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTcc > 1:410014/1‑95 (MQ=255) cGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCGgt < 2:1248833/150‑1 (MQ=255) cGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCGgt < 1:1118096/150‑1 (MQ=255) | TCATCAAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCGGT > NC_002947/490871‑491169 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |