| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 491,021 | G→A | 5.6% | A468V (GCG→GTG) ‡ | lptD ← | LPS‑assembly protein LptD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 491,021 | 0 | G | A | 5.6% | 501.2 / 12.4 | 160 | A468V (GCG→GTG) ‡ | lptD | LPS‑assembly protein LptD |
| Reads supporting (aligned to +/- strand): ref base G (69/82); new base A (5/4); total (74/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 160 total aligned reads displayed.
ATCAAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCGGT > NC_002947/490873‑491169 | tcaAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGcc > 2:28501/1‑150 (MQ=255) aaGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGGCGCCAtc > 2:4830415/1‑150 (MQ=255) gACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCAtctc < 2:3184457/150‑1 (MQ=255) ggCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTa < 1:28386/150‑1 (MQ=255) ggCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTACGAGATGGCGACCATCTCgca < 2:1725005/150‑3 (MQ=255) tGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCAt < 2:889364/150‑1 (MQ=255) tGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGCGACCATCTCGCAgatca < 2:2182791/150‑5 (MQ=255) tCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGc < 1:4778793/150‑1 (MQ=255) cTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGcac > 2:2311877/1‑150 (MQ=255) tCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACAt < 1:2876974/150‑1 (MQ=255) gATCACGATCAAAGCGAAGAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGTACGGCAGCGTAGCGTTCAGGGTGAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCGTGCAGATTCa > 2:3273682/1‑150 (MQ=255) gATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCa > 2:3749780/1‑150 (MQ=255) aTCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCaa < 1:4255333/150‑1 (MQ=255) cACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAAcc > 2:1118096/1‑150 (MQ=255) cGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACcgc < 1:3687778/150‑1 (MQ=255) gATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTc > 1:2018048/1‑143 (MQ=255) gATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACcgcg > 1:3627915/1‑150 (MQ=255) tCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTa < 2:3326543/128‑1 (MQ=255) aaGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGgtg > 1:3639651/1‑150 (MQ=255) gCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTa < 2:30727/150‑1 (MQ=255) aaCAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCt < 1:3521821/150‑1 (MQ=255) aCAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTg > 2:334324/1‑150 (MQ=255) ttCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACCTTCAACCGCGCGGTGTAGCTGTCGcc > 2:3533384/1‑150 (MQ=255) ttCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGcc > 2:484714/1‑150 (MQ=255) ttCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGcc > 1:4468624/1‑150 (MQ=255) tCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCt < 2:2805974/150‑1 (MQ=255) cAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTc < 2:4937728/150‑1 (MQ=255) cAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTc < 1:2280526/150‑1 (MQ=255) ctcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTa < 2:1319762/150‑1 (MQ=255) ctcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGGAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTa < 2:4431014/150‑1 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAg < 2:1838607/150‑1 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAg < 1:2955784/150‑1 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAg > 1:5309753/1‑150 (MQ=255) tcGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAg < 1:2044575/150‑1 (MQ=255) cGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAgg > 2:4811151/1‑150 (MQ=255) cccAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCaa > 2:4011963/1‑150 (MQ=255) cccAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCaa > 1:568280/1‑150 (MQ=255) ccAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAAc > 2:3686743/1‑150 (MQ=255) ccAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAAc < 1:276834/150‑1 (MQ=255) ccAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAAc > 1:26012/1‑150 (MQ=255) cAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACg > 1:4183594/1‑150 (MQ=255) aaGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCAtc < 1:3913124/94‑1 (MQ=255) aaGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGc > 1:2996441/1‑150 (MQ=255) aGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCa < 2:1934901/150‑1 (MQ=255) gTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCAcc > 2:3818003/1‑150 (MQ=255) aaaCCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCctgc < 2:5085382/150‑1 (MQ=255) cGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGt < 1:2311877/150‑1 (MQ=255) ccAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTc < 1:334324/150‑1 (MQ=255) cAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTca > 1:3046606/1‑150 (MQ=255) aGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcag > 1:5036557/1‑150 (MQ=255) aGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcag > 1:691490/1‑150 (MQ=255) ggCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCctgctgaaccagc < 2:2202051/150‑8 (MQ=255) gCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcagca < 2:117415/150‑1 (MQ=255) gCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcagca < 2:4529899/150‑1 (MQ=255) gCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcagca < 2:2077742/150‑1 (MQ=255) tGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGAACCAGCAgg < 2:474155/150‑1 (MQ=255) cGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTc < 1:1074983/150‑1 (MQ=255) cAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAAt < 2:5309753/150‑1 (MQ=255) ggTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCAccc < 2:1465859/112‑1 (MQ=255) ggTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCAccc > 1:1465859/1‑112 (MQ=255) ggTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTg > 1:243208/1‑150 (MQ=255) ggTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTg < 2:5031564/150‑1 (MQ=255) gTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTgg < 2:1644451/150‑1 (MQ=255) cAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTc < 2:2124333/150‑1 (MQ=255) cAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTc < 2:3258916/150‑1 (MQ=255) aGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCctgctgaacc > 2:679134/1‑113 (MQ=255) aGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCctgctgaacc < 1:679134/117‑5 (MQ=255) gCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCgg > 1:563465/1‑150 (MQ=255) tGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGAt < 2:3350478/150‑1 (MQ=255) tGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGAt > 1:5181340/1‑150 (MQ=255) tGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGAt > 1:5181350/1‑150 (MQ=255) ggCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTcc < 2:243208/150‑1 (MQ=255) gCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTc > 1:2543913/1‑150 (MQ=255) gATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCt > 2:2653216/1‑150 (MQ=255) gATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGAGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCt < 2:5089339/150‑1 (MQ=255) aTCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTg > 1:4461945/1‑150 (MQ=255) cATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGa > 1:507033/1‑150 (MQ=255) aTACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGaa < 2:3735455/150‑1 (MQ=255) tGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACg < 1:472728/150‑1 (MQ=255) tGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACg < 2:4602251/150‑1 (MQ=255) tGATCTGAGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACg < 1:3273682/150‑1 (MQ=255) atgccTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCgg > 2:3191141/5‑104 (MQ=255) aTCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACggg < 2:4331627/150‑1 (MQ=255) aTCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACggg < 2:4601339/150‑1 (MQ=255) tacGAGATGGCGACCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCg > 2:4252103/3‑150 (MQ=255) tacGAGATGGCGACCATCTCGCAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCg > 1:1866772/3‑150 (MQ=255) gCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAGCGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAActcccctg > 1:953027/1‑143 (MQ=255) acGAGATGGCGACCATCTCGCAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcagca > 2:1561212/2‑90 (MQ=255) acGAGATGGCGACCATCTCGCAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTcagca < 1:1561212/89‑1 (MQ=255) cGAGATGGTCGCCATCTCGTAGGCATGCACATACAACCGCGCGGTGTAGCCGTCGCCTCGGTAGGTCAACGCACCCAGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGAGTCCAGGTCCTGGAAGTAGAACGGGTCGCt < 2:2513719/150‑1 (MQ=255) agaTGGTCGCCATCTCGTAGGCATGTACATTCAACCGCGCGGGGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGa < 2:3367620/150‑1 (MQ=255) gaTGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGAt > 2:4883168/1‑150 (MQ=255) gTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCg > 1:4522130/1‑150 (MQ=255) gTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCg < 1:3818003/150‑1 (MQ=255) gTCGCCATCTCGTAGGCAGGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTGTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCg < 2:5003934/150‑1 (MQ=255) tCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTcc < 2:410014/95‑1 (MQ=255) tCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTcc > 1:410014/1‑95 (MQ=255) cGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCGgt < 2:1248833/150‑1 (MQ=255) cGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCGgt < 1:2143767/150‑1 (MQ=255) cGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCGgt < 1:1118096/150‑1 (MQ=255) | ATCAAAGACGGCACTGTCCTTCAGATCACGATCAAAGCGAACAGCTTCAGTCTCGTACCCAAGGTTCAAACCGCCAGGCTGGAACGGCAGCGTACCGTTCAGGGTCAGCTGCGGCAGGCGATCATACGGCGTGATCTGCGAGATGGTCGCCATCTCGTAGGCATGCACATTCAACCGCGCGGTGTAGCTGTCGCCTCGGTAGGTCAACGCACCCTGCTGGTTCAGCAGGTCGCGGCTTTCCACGCCAATCTGGTCGGATTCCAGGTCCTGGAAGTAGAACGGGTCGCTGATGTCGGT > NC_002947/490873‑491169 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |