| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 542,654 | C→T | 11.5% | R297R (CGC→CGT) | rpoC → | DNA‑directed RNA polymerase subunit beta' |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 542,654 | 0 | C | T | 11.5% | 569.4 / 49.6 | 210 | R297R (CGC→CGT) | rpoC | DNA‑directed RNA polymerase subunit beta' |
| Reads supporting (aligned to +/- strand): ref base C (98/87); new base T (9/15); total (108/102) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 214 total aligned reads displayed.
CTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTCCGTCAGAACTTGCTCGGTAAGC > NC_002947/542508‑542799 | tGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCAtgc < 1:3476465/150‑1 (MQ=255) gCGTCCTCTGGTTCCGCTCGATGGCGGTCGTTTTGCTACATCCGATCTCAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAAGCGTAtgtt > 2:2840544/1‑148 (MQ=255) gCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCAtgct > 1:4048275/1‑150 (MQ=255) tCCTCTGGTTCCGCTCGATGGCGGTCGTTTTGCTACATCCGATCTCAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAAGCGTATGTTGCa < 1:767917/150‑1 (MQ=255) tCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCa < 1:4364479/150‑1 (MQ=255) ccGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAg > 1:480776/1‑150 (MQ=255) tcTGGTTCCGCTCGATGGCGGTCGTTTTGCTACATCCGATCTCAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAAGCGTATGTTGCAGGa > 2:1171149/2‑150 (MQ=255) gCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAgcgc < 1:2773288/139‑1 (MQ=255) gCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGa > 1:1301905/1‑150 (MQ=255) cTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGaa > 1:1970458/1‑150 (MQ=255) cTGGTTCCGCTCGATGGCGGTCGTTTTGCTACATCCGATCTCAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAAGCGTATGTTGCAGGaa < 2:536004/150‑1 (MQ=255) tGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAg > 1:2988441/1‑150 (MQ=255) ggTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGc > 1:1730363/1‑150 (MQ=255) gTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCg > 2:552282/1‑150 (MQ=255) ttCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCgg < 1:5011871/150‑1 (MQ=255) tCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGt < 1:1062630/150‑1 (MQ=255) gCTCGATGGCGGTCGTTTTGCTACATCCGATCTCAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAAGCGTATGTTGCAGGAAGCTGTTGa > 1:3976556/1‑150 (MQ=255) gATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGct < 2:248358/150‑1 (MQ=255) gtggCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTctgc > 2:1374642/1‑150 (MQ=255) tggCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTctgct < 2:3354394/150‑1 (MQ=255) cggtcGTTTTGCTACATCCGATCTCAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAAGCGTATGTTGCAGGAAGCTGTTGACGCGctgtt < 2:470/146‑3 (MQ=255) ggCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTctgctg < 1:5252351/150‑1 (MQ=255) gCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGaa > 2:1567718/1‑131 (MQ=255) gCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGaa < 1:1567857/131‑1 (MQ=255) ccGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGa < 2:1119178/150‑1 (MQ=255) gTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACa > 1:1145393/1‑150 (MQ=255) cgcgACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACgg < 1:3885865/150‑1 (MQ=255) cgcgACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGCGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACgg > 1:4467210/1‑150 (MQ=255) cgACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGcc > 2:5010837/1‑150 (MQ=255) ttCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCcgtcg > 1:1374650/1‑150 (MQ=255) tCCGATCTCAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAAGCGTATGTTGCAGGAAGCTGTTGACGCGCTGTTCGATAACGGCcgtcgt > 2:4487835/1‑150 (MQ=255) ccGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTg < 2:3777744/150‑1 (MQ=255) ccGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTg > 1:1004409/1‑150 (MQ=255) ccGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTg < 2:1642609/150‑1 (MQ=255) ccGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTg < 2:2302756/150‑1 (MQ=255) cTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTcgc > 1:854451/1‑150 (MQ=255) aaCGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGcc > 2:1398962/1‑150 (MQ=255) cTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACt > 2:3197162/1‑150 (MQ=255) gTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTgg > 2:1602191/1‑150 (MQ=255) gTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTgg < 2:4711526/150‑1 (MQ=255) gtcgtgTGATCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAAGCGTATGTTGCAGGAAGCTGTTGACGCGCTGTTCGATAACGGc < 1:2837550/117‑1 (MQ=255) ccGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGaa > 2:3129388/1‑150 (MQ=255) aTCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGt < 2:3926812/150‑1 (MQ=255) aTCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGt < 2:3418623/150‑1 (MQ=255) tCAACCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAAGCGTATGTTGCAGGAAGCTGTTGACGCGCTGTTCGATAACGGCCGTCGTGGCCGCGTCATCACCGGTGCTAACAAGCGTc < 2:2154045/150‑1 (MQ=255) tCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTc > 2:3162788/1‑150 (MQ=255) cAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTcc < 2:3115832/150‑1 (MQ=255) aCCGTAACAACCGTCTGAAGCGTCTTATTGAACTGCGCGCTCCTGGCATCATTATCCGTAACGAAAAGCGTATGTTGCAGGAAGCTGTTGACGCGCTGTTCGATAACGGCCGTCGTGGCCGCGTCATCACCGGTGCTAACAAGCGTCCGc > 1:350854/1‑150 (MQ=255) cGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACg < 2:3729843/91‑1 (MQ=255) cGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACg > 1:3729843/1‑91 (MQ=255) tAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGaa < 1:5400710/150‑1 (MQ=255) aacaacCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTg > 2:1804820/1‑112 (MQ=255) aacCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTcc > 1:1546775/1‑150 (MQ=255) aacCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTcc > 2:19247/1‑150 (MQ=255) acCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTccc > 1:633745/1‑150 (MQ=255) gAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTTCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGa < 1:675642/150‑1 (MQ=255) gAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGa > 1:4728097/1‑150 (MQ=255) aaGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGAc > 1:219913/1‑150 (MQ=255) gcgcCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTcc < 2:2989609/139‑1 (MQ=255) gcCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGa < 2:2666285/150‑1 (MQ=255) ctgctgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATc > 1:753566/1‑150 (MQ=255) ctgctgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATc < 2:2791176/150‑1 (MQ=255) ctgctgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATc > 2:2021155/1‑150 (MQ=255) tgctgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCa > 1:4102986/1‑150 (MQ=255) ctgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCaaa < 1:552282/150‑1 (MQ=255) tgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAg < 1:3342710/150‑1 (MQ=255) tgGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAg < 1:1260003/150‑1 (MQ=255) ggATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTc < 1:181416/108‑1 (MQ=255) cTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAg > 1:3075390/1‑150 (MQ=255) gTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCa > 2:4579505/1‑150 (MQ=255) tCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGc < 1:5090750/115‑1 (MQ=255) tCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGc > 2:5090750/1‑115 (MQ=255) ggCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAgg > 2:2244895/1‑150 (MQ=255) ggCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAgg > 2:1908213/1‑150 (MQ=255) ggCGCCGGACATCATCGTGCGCAACGAAAAGCGAATGCTGCAGGAAGCGGTTGACGCTCTGCAGGACAACGGACGTCGTGGACGAGCCATCACTGGCTATAACAAGCGTCCGCTGAAGTCCCTGTCCGACATGAACAAAGGTAAGCAAgt > 1:2231592/1‑149 (MQ=255) gcCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCg > 2:1540890/1‑150 (MQ=255) cGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGtt < 1:2438690/150‑1 (MQ=255) ggACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGttt > 2:4249140/1‑150 (MQ=255) gACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTc < 1:4249209/150‑1 (MQ=255) atcatcGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTCCGt < 2:5148021/150‑1 (MQ=255) tcatcGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTCCGTc < 1:4161694/150‑1 (MQ=255) tcatcGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTCCGTc < 1:306540/150‑1 (MQ=255) catcGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTCCGTCa < 1:3787745/150‑1 (MQ=255) catcGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTCCGTCa < 1:4595790/150‑1 (MQ=255) atcGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCaaa < 2:28333/126‑1 (MQ=255) gcgcAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTCCGTCAGAACtt < 1:434283/150‑1 (MQ=255) gcAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCaa < 1:4860767/118‑1 (MQ=255) gcAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTCCGTCAGAACTTGc > 2:4744192/1‑150 (MQ=255) taaCGAAAAGCGTATGTTGCAGGAAGCTGTTGACGCGCTGTTCGATAACGGCCGTCGTGGCCGCGTCATCACCGGTGCTAACAAGCGTCCGCTGAAGTCGCTCTCCGACATGCTCAAGGGTAAGCAGGGTCGttt < 2:5318595/134‑1 (MQ=255) cAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTCCGTCAGAACTTGCt > 1:2828827/1‑150 (MQ=255) aaCGAAAAGCGTATGTTGCAGGAAGCTGTTGACGCGCTGTTCGATAACGGCCGTCGTGGCCGCGTCATCACCGGTGCTAACAAGCGTCCGCTGAAGTCGCTCTCCGACATGCTCAAGGGTAAGCAGGGTCGTTTCCGTCAGAACCTtctc < 2:626992/150‑1 (MQ=255) aaCGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGcc < 2:3681567/105‑1 (MQ=255) aaCGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGttt > 2:2645550/1‑134 (MQ=255) aaCGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGttt < 1:2645550/134‑1 (MQ=255) aaCGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGtt < 2:3789970/133‑1 (MQ=255) aaCGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTCCGTCAGAACTTGCTc > 2:4423353/1‑150 (MQ=255) aCGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTCCGTCAGAACTTGCTCg < 2:1970458/150‑1 (MQ=255) gAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTCCGTCAGAACTTGCTCGGt > 2:786187/1‑150 (MQ=255) gAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTCCGTCAGAACTTGCTCGGt > 1:2382859/1‑150 (MQ=255) aGCGTATGTTGCAGGAAGCTGTTGACGCGCTGTTCGATAACGGCCGTCGTGGCCGCGTCATCACCGGTGCTAACAAGCGTCCGCTGAAGTCGCTCTCCGACATGCTCAAGGGTAAGCAGGGTCGTTTCCGTCAGAACCTTCTCGGTAAGc < 2:3976582/150‑1 (MQ=255) | CTGCGTCCGCTGGTTCCGCTGGATGGTGGCCGTTTCGCGACTTCCGACCTGAACGACCTGTATCGCCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTGGATCTGTCGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTTGACGCTCTGCTGGACAACGGCCGTCGTGGTCGCGCCATCACTGGCTCGAACAAGCGTCCGCTGAAGTCCCTGGCCGACATGATCAAAGGTAAGCAAGGTCGTTTCCGTCAGAACTTGCTCGGTAAGC > NC_002947/542508‑542799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |