| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 587,079 | C→G | 7.5% | P43R (CCG→CGG) | PP_0497 → | Cro/CI family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 587,079 | 0 | C | G | 7.5% | 567.6 / 26.4 | 174 | P43R (CCG→CGG) | PP_0497 | Cro/CI family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (93/68); new base G (9/4); total (102/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
Only 100 of 180 total aligned reads displayed.
TCGCGTCACCTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAGTTGTTCC > NC_002947/586930‑587228 | gcgTCACCTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGa > 2:648711/1‑150 (MQ=255) ccTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCtt < 1:4245/150‑1 (MQ=255) cTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCttt < 2:4546643/150‑1 (MQ=255) tGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTc > 2:1938951/1‑150 (MQ=255) gATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCaa < 1:3908644/150‑1 (MQ=255) gATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCaa < 2:4557318/150‑1 (MQ=255) aTTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAc < 1:4459746/150‑1 (MQ=255) aTTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAc < 2:1951365/150‑1 (MQ=255) ttCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAcc > 1:5344034/1‑150 (MQ=255) ccGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTg > 1:2401682/1‑150 (MQ=255) cGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGa > 1:3990194/1‑150 (MQ=255) gCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGaa < 1:4140617/150‑1 (MQ=255) atatGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGc > 2:4379298/1‑150 (MQ=255) gAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTAt > 1:1010280/1‑150 (MQ=255) gCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCg > 2:1983295/1‑150 (MQ=255) tCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGa > 1:38373/1‑150 (MQ=255) tCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGa < 1:408637/150‑1 (MQ=255) cTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCg < 1:400315/150‑1 (MQ=255) cTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCg < 2:110552/150‑1 (MQ=255) tACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCgg > 1:292968/1‑150 (MQ=255) tACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCgg > 2:1555397/1‑150 (MQ=255) tACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCgg > 1:2004906/1‑150 (MQ=255) aCAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGgt > 2:3933183/1‑150 (MQ=255) cAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGgtg > 1:2623368/1‑150 (MQ=255) aaaCCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGgtgt > 1:4174889/1‑150 (MQ=255) ccTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGa < 1:4202432/150‑1 (MQ=255) cTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAg > 2:3186047/1‑150 (MQ=255) cTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAg < 1:1714848/150‑1 (MQ=255) tCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGa < 2:3899795/148‑1 (MQ=255) tCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAgg < 1:278387/150‑1 (MQ=255) tCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAgg > 2:4634037/1‑150 (MQ=255) cAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGa < 2:2258787/150‑1 (MQ=255) aaCTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGAtt < 2:1396765/150‑1 (MQ=255) ttGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACg > 2:327743/1‑150 (MQ=255) ttGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACg < 2:1081963/150‑1 (MQ=255) ttGCCTGCAGTCACTACCGCTCTATTTACGAAGTTTGCATCCAGCTGTATATCAACCGCTCTCAGTTCAACAATTACCTGAGAGTGCAAAGCCGTCCGACGGATTTCAACATGAAGCGTATCGGCTACTTCTTCGGTGTCgatgataaag > 2:3437259/1‑146 (MQ=255) gCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGaa < 1:4297660/150‑1 (MQ=255) gCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGaa < 1:3241956/150‑1 (MQ=255) ccTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAAc > 2:947336/1‑150 (MQ=255) ccTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGAAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAAc < 2:2641049/150‑1 (MQ=255) cTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACt > 1:2600442/1‑150 (MQ=255) tCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCt > 2:1022541/1‑150 (MQ=255) aCTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAc < 1:2162446/98‑1 (MQ=255) tACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGccc > 2:4045703/1‑150 (MQ=255) tACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGccc > 1:2102358/1‑150 (MQ=255) gccGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGTAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCccg > 1:829170/2‑150 (MQ=255) ccGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCccgc > 1:1927980/1‑150 (MQ=255) cGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCt > 2:2950553/1‑143 (MQ=255) cGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCccgcc > 2:4842408/1‑150 (MQ=255) tATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCa > 2:5223035/1‑150 (MQ=255) tCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTc > 1:1501258/1‑150 (MQ=255) tCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTc > 2:4413714/1‑150 (MQ=255) cGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGc > 1:3757653/1‑150 (MQ=255) cGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACCGAACCTGCCCGCCGAGCAGTTCGc > 1:640997/1‑150 (MQ=255) gAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACgg < 2:2361493/73‑1 (MQ=255) gTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGGTCGCCCGt > 1:4273658/1‑150 (MQ=255) tttGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGGACCTGCCCGCCGAGCAGTTCGCCCGTc < 1:2584503/150‑1 (MQ=255) tttGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTc < 2:3186721/150‑1 (MQ=255) ccgccAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGAt < 2:3601630/150‑1 (MQ=255) gccAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCg < 2:2093067/150‑1 (MQ=255) ccAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCgg > 1:1073038/1‑150 (MQ=255) cTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTgcg > 1:3029839/1‑150 (MQ=255) tGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGc > 1:5267556/1‑126 (MQ=255) gTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGcgcg > 2:3484981/1‑150 (MQ=255) tCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGTCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCTCgg < 2:3232921/150‑1 (MQ=255) tCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCgg > 1:2694999/1‑150 (MQ=255) tCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCgg < 1:4634037/150‑1 (MQ=255) gATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGt > 1:2213371/1‑150 (MQ=255) tCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCa > 2:1645446/1‑121 (MQ=255) tCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCa < 1:1645446/121‑1 (MQ=255) aaCCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCg > 1:4006618/1‑150 (MQ=255) aCCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGc > 1:3470922/1‑150 (MQ=255) gcgcgcAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGcccc > 1:3691665/1‑150 (MQ=255) gcgcAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAg < 2:2600442/150‑1 (MQ=255) gcAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGc > 2:586893/1‑150 (MQ=255) gTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCa < 1:1938951/150‑1 (MQ=255) gTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCa < 2:1920573/150‑1 (MQ=255) ttCAATAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAg > 1:2876649/1‑150 (MQ=255) aacaaGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCaa > 1:1147820/1‑150 (MQ=255) acaaGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAAc > 2:3737776/1‑150 (MQ=255) aGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCa < 2:5344034/150‑1 (MQ=255) gTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAg > 1:5191404/1‑150 (MQ=255) tACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGt < 1:3186047/150‑1 (MQ=255) ccTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGa < 1:32845/150‑1 (MQ=255) cTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGAc < 1:4068955/150‑1 (MQ=255) tGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGAcc < 1:4379298/150‑1 (MQ=255) tGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGAcc > 2:5279418/1‑150 (MQ=255) ttgaaaGCCGTCGGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGt > 1:102712/4‑140 (MQ=255) ttgaaaGCCGTCGGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCa > 1:4456811/4‑150 (MQ=255) gCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAg > 1:4362974/1‑150 (MQ=255) gCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAg < 1:3372805/150‑1 (MQ=255) cAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGc < 2:38373/150‑1 (MQ=255) aaaGCCGTCGGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCg > 1:4950369/1‑150 (MQ=255) aaaGCCGTCGGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCg > 1:4950310/1‑150 (MQ=255) aaaGCCGTCGGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCg > 1:4950183/1‑150 (MQ=255) aaGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGa < 2:2488029/150‑1 (MQ=255) aGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAg > 1:2345208/1‑150 (MQ=255) ccGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAGTTGTTc < 2:3706345/150‑1 (MQ=255) ccGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAGTTGTTc < 1:648711/150‑1 (MQ=255) cGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAGTTGTTcc < 1:3837714/150‑1 (MQ=255) | TCGCGTCACCTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAGTTGTTCC > NC_002947/586930‑587228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |