BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	593,437	A→C	7.8%	E391A (GAG→GCG) ‡	PP_0503 →	MFS transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	593,437	0	A	C	7.8%	562.3 / 19.1	190	E391A (GAG→GCG) ‡	PP_0503	MFS transporter
Reads supporting (aligned to +/- strand): ref base A (84/89); new base C (3/14); total (87/103)
Fisher's exact test for biased strand distribution p-value = 1.99e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 196 total aligned reads displayed.

TTGCTATTCGCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCTTGGTGTCGATGTCGACGTACCAG  >  NC_002947/593288‑593585

ttGCTATTCGCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGa                                                                                                                                                      <  1:2745752/150‑1 (MQ=255)

ttGCTATTCGCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGa                                                                                                                                                      <  1:4217395/150‑1 (MQ=255)

ttGCTATTCGCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGa                                                                                                                                                      >  1:4475116/1‑150 (MQ=255)

 tGCTATTCGCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAg                                                                                                                                                     >  1:3505727/1‑150 (MQ=255)

  gCTATTCGCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAgg                                                                                                                                                    >  2:512536/1‑150 (MQ=255)

  gCTATTCGCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAgg                                                                                                                                                    >  2:2580198/1‑150 (MQ=255)

   cTATTCGCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGgc                                                                                                                                                   <  2:3373848/150‑1 (MQ=255)

    tATTCGCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGgcc                                                                                                                                                  >  2:4051642/1‑150 (MQ=255)

      ttCGCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGgccgc                                                                                                                                                >  1:5396029/1‑150 (MQ=255)

       tCGCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGTTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCTCGgccgcc                                                                                                                                               <  1:3366318/150‑1 (MQ=255)

       tCGCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGgccgcc                                                                                                                                               <  2:3062946/150‑1 (MQ=255)

         gCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCt                                                                                                                                             >  2:835038/1‑150 (MQ=255)

         gCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCt                                                                                                                                             >  1:3769897/1‑150 (MQ=255)

         gCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCt                                                                                                                                             <  1:3056309/150‑1 (MQ=255)

         gCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCt                                                                                                                                             >  1:3171065/1‑150 (MQ=255)

          cTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCTCGGCCGCCCtc                                                                                                                                            <  1:2974999/150‑2 (MQ=255)

          cTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCTCGGCCGCCCtc                                                                                                                                            <  1:3104936/150‑2 (MQ=255)

          cTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTg                                                                                                                                            >  1:1095320/1‑150 (MQ=255)

              gCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAAt                                                                                                                                        >  1:1886601/1‑150 (MQ=255)

              gCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAAt                                                                                                                                        >  1:4049144/1‑150 (MQ=255)

                aGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGt                                                                                                                                      <  2:3283247/150‑1 (MQ=255)

                 gCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGtt                                                                                                                                     <  2:4475116/150‑1 (MQ=255)

                   ggTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCa                                                                                                                                   <  2:4196288/150‑1 (MQ=255)

                   ggTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCa                                                                                                                                   >  2:536429/1‑150 (MQ=255)

                    gTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAg                                                                                                                                  <  2:4618152/150‑1 (MQ=255)

                    gTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAg                                                                                                                                  <  1:835038/150‑1 (MQ=255)

                    gTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAg                                                                                                                                  >  1:2278371/1‑150 (MQ=255)

                     tttGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCCGTGTGTGGGCTTGGCATGGGCATCAGTCCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAgg                                                                                                                                 <  2:146078/150‑1 (MQ=255)

                           ggCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGaa                                                                                                                           <  1:4656631/150‑1 (MQ=255)

                              ggTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACtt                                                                                                                        <  2:3505727/150‑1 (MQ=255)

                                 gtTGGCGAGCTGGGTGTTTGCACACTGGGGGTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTa                                                                                                                     <  1:3566164/150‑1 (MQ=255)

                                     gCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGc                                                                                                                   >  1:2590971/1‑148 (MQ=255)

                                     gCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCa                                                                                                                 >  1:4074662/1‑150 (MQ=255)

                                                gtctGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCAt                                                                                                      <  2:204993/147‑1 (MQ=255)

                                                gtTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCAt                                                                                                      <  2:4390677/150‑1 (MQ=255)

                                                gtTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCAt                                                                                                      <  2:5416403/150‑1 (MQ=255)

                                                    gCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGtat                                                                                                  >  2:1249943/1‑150 (MQ=255)

                                                      acacTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATAc                                                                                                <  2:3461510/150‑1 (MQ=255)

                                                        acTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCt                                                                                                                                             <  2:2815287/103‑1 (MQ=255)

                                                        acTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATAccc                                                                                              >  1:1782118/1‑150 (MQ=255)

                                                          tGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAGGACCGACCATGTATACCCAc                                                                                            <  1:757188/150‑1 (MQ=255)

                                                            ggtcTGGGTTGCGGTTTGTGGTGTTGTCATTGGGATCTGTGCCGCAGAAGTGTTCTAGTGGCTATTGCTGCAACGCGCGAGGGCGGCCGATGCCGCCCTGGATTGTTCATGTCAGTACTTGTAGCCATGACCTACCTTGTATACCCACgg                                                                                          <  2:3383538/147‑1 (MQ=255)

                                                             ggCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACggg                                                                                         >  1:3828732/1‑150 (MQ=255)

                                                              gCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGgt                                                                                        >  2:2385026/1‑150 (MQ=255)

                                                               cTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGgtc                                                                                       <  1:2382415/150‑1 (MQ=255)

                                                               cTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGgtc                                                                                       <  2:391506/150‑1 (MQ=255)

                                                                tGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGgtcg                                                                                      >  2:5152593/1‑150 (MQ=255)

                                                                tGGGTTGCGGTGTGAGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCAAGAATACCCACGGgtcg                                                                                      >  2:2424182/1‑150 (MQ=255)

                                                                 gggTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGgtcga                                                                                     >  1:531438/1‑150 (MQ=255)

                                                                    ttGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGgtcgacgg                                                                                  >  1:2450481/1‑149 (MQ=255)

                                                                            tgtgGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGgtcgacgtcgacgtcg                                                                          <  1:845987/150‑1 (MQ=255)

                                                                            tgtgGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGgtcgacgtcgacgtcg                                                                          <  2:246727/150‑1 (MQ=255)

                                                                             gtgGGCTTGGCTTGGGCATCTGGGCCGCCGCACTGTGCTAGTGGCTATGGCTGCACGGCGCGTGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGgtcgacgtcgacgtcga                                                                         <  1:4921888/150‑1 (MQ=255)

                                                                                 gCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGAccgt                                                                     >  1:1787347/1‑148 (MQ=255)

                                                                                    tGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCACCGCGCGCGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACAGGTCGACGTCGACGTCGAcccgtgg                                                                  <  1:4225119/150‑6 (MQ=255)

                                                                                        aTGGGCATCTGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGTGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTg                                                              <  1:4802569/150‑1 (MQ=255)

                                                                                         tGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCATGGTGTTGc                                                             >  1:126713/1‑150 (MQ=255)

                                                                                            gCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCACCGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGt                                                          >  2:295585/1‑150 (MQ=255)

                                                                                             cATCAGTGCCGCCGCCCTGTGCTACTGGCTCTGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTa                                                         <  1:2086071/150‑1 (MQ=255)

                                                                                             cATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTa                                                         <  2:2683002/150‑1 (MQ=255)

                                                                                             cATCAGGGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGCGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGGAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTa                                                         <  2:2217679/150‑1 (MQ=255)

                                                                                                 aGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGGCGTCGCCGTCGACCTTGGTCTTGCTGTAGCCa                                                     >  1:632747/1‑150 (MQ=255)

                                                                                                  gTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCaa                                                    <  1:401801/150‑1 (MQ=255)

                                                                                                   tGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAg                                                   >  2:4508713/1‑150 (MQ=255)

                                                                                                    gccgccGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCACCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAgg                                                  <  2:1777224/150‑1 (MQ=255)

                                                                                                    gccgccGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGCCCGAGCCCGCCCTTCAATTTTCAGGTAATAAATTGTAGCCAAGACCGACAATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAgg                                                  <  1:2838362/150‑1 (MQ=255)

                                                                                                     ccggcgCACTTTGCTTCTGTTTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCTATGTTCAGGTCAGAACTTGTAGCCTAGACGGACCATGTATACCCTCGGGTCGAGGTCGACGTCGACCTTGGTCTTGCTGTAGccttggg                                                 <  2:677938/150‑6 (MQ=255)

                                                                                                      cgccgcACTGTGCTACGGGCTATGGCGGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGc                                                <  2:5306394/150‑1 (MQ=255)

                                                                                                       gccgcACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCg                                               >  1:5333218/1‑150 (MQ=255)

                                                                                                         cgcAGTGTGGTGCTGGGTTTGGGTGCACCGCGCGCGGGCGGCCGCGGCCGCCCTGCAATGTTCAGGACAGAACTTGTAGCCAAGACCGACCATGTATCCCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGt                                             <  1:4051425/150‑1 (MQ=255)

                                                                                                               gtgCTACTGGCTTTGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGcc                                       <  1:4780374/150‑1 (MQ=255)

                                                                                                               gtgCTACTGGCTCTGGCTGCACCGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGGTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATCCCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGcc                                       <  2:4259332/150‑1 (MQ=255)

                                                                                                                tgCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCCGGTCAGAACTTGTAGCCACGACCGACCATGTAGACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCg                                      <  1:968190/150‑1 (MQ=255)

                                                                                                                   tACTGGCTATGGCTGCTACGCGCGTGGGCGGCGGAGGCCGCCCTGCAATGTTCAGGTCAGTACTTGTAGCCAAGACCGACCATGTATAGCCTCGGGTCGTCGTCGAGGTCGACGTTGGTCTTGCTGTAGCCAAGGGCGGTGGGGCCGTTg                                   >  2:1719437/1‑150 (MQ=255)

                                                                                                                   tACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTTCTGTAGCCAAGGGCGGTCGGGCCGGTg                                   >  1:1594778/1‑150 (MQ=255)

                                                                                                                     cTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGAc                                 <  2:4299902/150‑1 (MQ=255)

                                                                                                                      tGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGGCGCCGTCGACGTCGACCTTGGTCTTGCGGTAGCCAAGGGCGGGCGGGCCGTTGACg                                >  1:2967218/1‑150 (MQ=255)

                                                                                                                        gCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCt                              >  2:4754458/1‑150 (MQ=255)

                                                                                                                         ctcgggcggcACCGCGCGCGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTg                             <  1:4418972/146‑1 (MQ=255)

                                                                                                                              gCTGCCCCGCGCGCGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATCCCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCtt                        <  1:515140/150‑1 (MQ=255)

                                                                                                                              gCTGCACCGCGCGAGGGGGGCCGAGGCCGCCCTGCATTGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCtt                        <  1:1229361/150‑1 (MQ=255)

                                                                                                                               cTGCACCGCGCGCGGGCGGGCGCGGCCGCCCTGCAATGTTCAGGTCTGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCTTg                       <  1:2807082/150‑1 (MQ=255)

                                                                                                                                 gCACCGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCTTGgt                     <  1:428891/150‑1 (MQ=255)

                                                                                                                                 gCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCTTGgt                     <  2:965568/150‑1 (MQ=255)

                                                                                                                                 gCAACGCGCGAGGGCGGCCGAGCCCGCCCTGAAATGTTCAGTTAAGAACTTTTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCTTGgt                     <  1:4138612/150‑1 (MQ=255)

                                                                                                                                    aCGCGCGAGGGCGGCCGCGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCTTGGtgtc                  <  2:2573136/150‑1 (MQ=255)

                                                                                                                                    aCGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCTTGGtgtc                  <  2:1886601/150‑1 (MQ=255)

                                                                                                                                       cgcgAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGcc                                       <  1:1497238/126‑1 (MQ=255)

                                                                                                                                       cgcgAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGcc                                       >  2:1497238/1‑126 (MQ=255)

                                                                                                                                        tgcaGGGCGGCCTCGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCaa                                                    >  2:1112541/4‑112 (MQ=255)

                                                                                                                                        tgcaGGGCGGCCTCGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCaa                                                    <  1:1112541/109‑1 (MQ=255)

                                                                                                                                         cgAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCTTGGtgtcgatgt             <  2:4675760/150‑1 (MQ=255)

                                                                                                                                           aGGGCGGCCTCGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGgtcgacgtcgacgtcga                                                                         <  1:1001292/88‑1 (MQ=255)

                                                                                                                                           aGGGCGGCCTCGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGgtcgacgtcgacgtcga                                                                         >  2:1001292/1‑88 (MQ=255)

                                                                                                                                               cggcCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGGTGACGCTGGCCTTGGTGTCGATGTCGACga       >  1:1216974/1‑149 (MQ=255)

                                                                                                                                                  ccGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCTTGGTGTCGATGTCGACGTAcc    >  2:5435575/1‑150 (MQ=255)

                                                                                                                                                   cGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCTTGGTGTCGATGTCGACGTACCa   <  2:3171065/150‑1 (MQ=255)

                                                                                                                                                    gAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGGCGTTGACGCTGGCCTTGGTGTCGATGTCGACGTACCAg  >  2:933572/1‑150 (MQ=255)

                                                                                                                                                    gAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCTTGGTGTCGATGTCGACGTACCAg  >  2:1332670/1‑150 (MQ=255)

                                                                                                                                                    gAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCGGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCTTGGTGTCGATGTCGACGTACCAg  >  1:1739911/1‑150 (MQ=255)

TTGCTATTCGCTGGGCAGCGGTTTGGGGGCGGTGTTGGCGAGCTGGGTGTTTGCACACTGGGGCTGGGTTGCGGTGTGTGGGCTTGGCATGGGCATCAGTGCCGCCGCACTGTGCTACTGGCTATGGCTGCAACGCGCGAGGGCGGCCGAGGCCGCCCTGCAATGTTCAGGTCAGAACTTGTAGCCAAGACCGACCATGTATACCCACGGGTCGACGTCGACGTCGACCTTGGTCTTGCTGTAGCCAAGGGCGGTCGGGCCGTTGACGCTGGCCTTGGTGTCGATGTCGACGTACCAG  >  NC_002947/593288‑593585

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`