| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 625,065 | C→T | 7.2% | intergenic (‑156/+27) | PP_0537 ← / ← ppa | transcriptional regulator/inorganic pyrophosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 625,065 | 0 | C | T | 7.2% | 667.6 / 27.6 | 221 | intergenic (‑156/+27) | PP_0537/ppa | transcriptional regulator/inorganic pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base C (113/91); new base T (7/9); total (120/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 222 total aligned reads displayed.
GAGTGTAGCGGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTG > NC_002947/624916‑625211 | gAGTGTAGCGGCGGGTTGCCAGTAAGGAAATGAAACGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGcc > 2:1878859/1‑150 (MQ=255) gtgtAGCGGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCaa > 2:1131344/1‑150 (MQ=255) gcggcgGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCTTTCAGGCATGAAAAACCCCGCCAAAGCgg > 2:4741456/1‑150 (MQ=255) cggcggGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCggg < 2:1613218/150‑1 (MQ=255) gggTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCTTTGGCGGGGttt < 1:3877957/150‑1 (MQ=255) gggTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCTTTGGCGGGGttt < 2:446404/150‑1 (MQ=255) gggTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGttt > 1:2386257/1‑150 (MQ=255) gTTGCCAGTAAGGAAATGACCCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTcc < 2:4535299/150‑1 (MQ=255) gTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAGAAACCCCGCTTTGGCGGGGttttt < 1:3226058/150‑3 (MQ=255) ttGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCTTTGGCGGGGtttttc < 1:3869489/150‑4 (MQ=255) cAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCa > 2:2495642/1‑150 (MQ=255) tAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTc > 2:4666159/1‑150 (MQ=255) ggAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGaa < 1:880028/150‑1 (MQ=255) ggAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGaa > 1:4851545/1‑150 (MQ=255) gAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGaaa > 1:3643451/1‑150 (MQ=255) gAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGaaa > 1:3556349/1‑150 (MQ=255) aaTGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCggg > 2:979866/1‑130 (MQ=255) aaTGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATc > 1:2996498/1‑150 (MQ=255) aaTGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATc > 2:1306306/1‑150 (MQ=255) gAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGc < 1:2046362/150‑1 (MQ=255) aaCCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGcc < 1:404194/150‑1 (MQ=255) ccGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCt > 2:2613816/1‑150 (MQ=255) gggTGTTGACGGGATTTGTACGAAAAGAGGCTGTTGGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTg < 2:3713913/150‑1 (MQ=255) ggTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGt < 1:1228073/150‑1 (MQ=255) ggTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGt > 2:2848055/1‑150 (MQ=255) aCGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCATCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCgg < 2:1430180/113‑1 (MQ=255) aCGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGc < 1:2981818/150‑1 (MQ=255) gATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGAcc > 2:1833204/1‑150 (MQ=255) gTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGAttt > 1:1193926/1‑150 (MQ=255) tACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTa < 2:3383731/134‑1 (MQ=255) tACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTa > 1:3383731/1‑134 (MQ=255) aCGAAAAGATGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCTGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGTCAGCGACCGAttttg < 2:3740360/150‑3 (MQ=255) cGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGt > 1:1804674/1‑150 (MQ=255) gAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCGGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTg > 2:1809048/1‑150 (MQ=255) gAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTg < 1:1558478/129‑1 (MQ=255) agGCTGTTTGTAGGATGCTGGTGTAGGACGGTGTAGGATTTGGTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAACGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATcgcg < 2:3155723/150‑1 (MQ=255) cTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCa > 2:294692/1‑150 (MQ=255) gTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACg > 2:493841/1‑150 (MQ=255) gTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACg > 1:4324690/1‑150 (MQ=255) tttGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGAcc < 1:1088930/129‑1 (MQ=255) tttGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACgg > 2:4878811/1‑150 (MQ=255) tGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGggc < 1:4747038/150‑1 (MQ=255) aGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGggcggc > 2:2204488/1‑150 (MQ=255) gATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGt > 1:2612480/1‑150 (MQ=255) tGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGgcg > 1:5034041/1‑150 (MQ=255) ggTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGgcgc < 2:1238768/150‑1 (MQ=255) gtgtAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGcc > 2:3164276/1‑150 (MQ=255) tAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTc > 2:2122595/1‑150 (MQ=255) aGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTcc < 1:312014/150‑1 (MQ=255) gACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCa > 2:2414694/1‑150 (MQ=255) tgtgTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATATGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGcc > 2:165175/1‑150 (MQ=255) tgtAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCtt > 2:2318594/1‑150 (MQ=255) tgtAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCtt < 2:2612480/150‑1 (MQ=255) tAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCg > 1:3086986/1‑150 (MQ=255) aGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGa < 1:4868110/150‑1 (MQ=255) aGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGa < 1:844033/150‑1 (MQ=255) aGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGa > 1:5140927/1‑150 (MQ=255) gATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATc > 1:436045/1‑150 (MQ=255) tttGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCtt < 1:2780985/150‑1 (MQ=255) ttCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGAcc > 2:5111481/1‑150 (MQ=255) ttCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGAcc < 1:1016001/150‑1 (MQ=255) ttCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGAcc < 1:4519916/150‑1 (MQ=255) ccAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCAc < 2:1193926/150‑1 (MQ=255) ccAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGCGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCAc > 2:3099551/1‑150 (MQ=255) ctgcagTGAGCGCGTTCCATTCAGGCATGTAATACCCCGCCAATGCGGGGTTTCGCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCTGCCTTCGATCTTGACCctct < 2:5448090/148‑1 (MQ=255) agcagTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGGGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACtt < 2:5287818/150‑1 (MQ=255) gcagTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTg < 1:530571/150‑1 (MQ=255) cagTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGc < 2:4325194/150‑1 (MQ=255) cagTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGc < 2:4059652/150‑1 (MQ=255) gTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGccc < 2:3402683/150‑1 (MQ=255) cgcgTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTtctc < 1:3438539/150‑1 (MQ=255) gcgTTCCTTTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCg < 1:4741456/150‑1 (MQ=255) gcgGTCCAGTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCg > 2:5225100/1‑150 (MQ=255) ttCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCgaga > 2:4120829/1‑150 (MQ=255) cATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCt > 1:2167466/1‑150 (MQ=255) cATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCt < 2:1007604/150‑1 (MQ=255) aTTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCtt > 1:465200/1‑150 (MQ=255) ttCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCttt > 1:782032/1‑150 (MQ=255) ttCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCttt < 1:271232/150‑1 (MQ=255) ttCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCttt < 1:904795/150‑1 (MQ=255) aGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTa > 1:2569276/1‑150 (MQ=255) gCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGgcgc < 2:3862296/99‑1 (MQ=255) gCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGgcgc > 1:3862296/1‑99 (MQ=255) gCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGt > 1:4307245/1‑150 (MQ=255) gCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGt < 1:1856349/150‑1 (MQ=255) cATGAAACACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGtt < 2:5233704/150‑1 (MQ=255) aTGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTg > 2:926230/1‑150 (MQ=255) tGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGgc > 1:1724077/1‑94 (MQ=255) gAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTa < 2:3786175/144‑1 (MQ=255) gAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTa > 1:3786175/1‑144 (MQ=255) gAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGc > 1:3584095/1‑150 (MQ=255) gAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGc < 2:296828/150‑1 (MQ=255) ggaaaCCCCGCTTTGGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCtt > 1:5219463/3‑113 (MQ=255) ggaaaCCCCGCTTTGGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCa > 2:866321/3‑150 (MQ=255) aaaaaCCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCa > 1:2211241/1‑150 (MQ=255) ccccGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAaagaa < 1:1416916/150‑1 (MQ=255) ccccGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAaagaa < 2:2725891/150‑1 (MQ=255) ccccGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAaagaa < 2:803961/150‑1 (MQ=255) cccGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAaagaag < 1:3118347/150‑1 (MQ=255) cccGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAaagaag > 2:1984195/1‑150 (MQ=255) | GAGTGTAGCGGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGCGTCGGCGCCTTCCCAGCCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTG > NC_002947/624916‑625211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |