| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 654,401 | C→A | 8.2% | L115L (CTG→CTT) | ctpL ← | methyl‑accepting chemotaxis protein CtpL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 654,401 | 0 | C | A | 8.2% | 540.9 / 25.9 | 167 | L115L (CTG→CTT) | ctpL | methyl‑accepting chemotaxis protein CtpL |
| Reads supporting (aligned to +/- strand): ref base C (101/52); new base A (8/6); total (109/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 167 total aligned reads displayed.
GCCCCAGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGG > NC_002947/654253‑654548 | gccCCAGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCa > 2:5002036/1‑150 (MQ=255) ccAGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCt > 1:16706/1‑150 (MQ=255) cAGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCtt < 1:106888/150‑1 (MQ=255) tGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCcg < 2:3616915/150‑1 (MQ=255) gCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCcgg < 2:1143944/150‑1 (MQ=255) gCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCcgg > 1:1332525/1‑150 (MQ=255) gggTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCcggcgg < 2:1320119/150‑1 (MQ=255) gggTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCAAGCTGGCcggcga < 2:3439906/150‑2 (MQ=255) gTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGCCGCCGGCAAGCTGGCCGGCGAcccacaa < 1:1696218/150‑6 (MQ=255) tCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGt < 2:2760245/150‑1 (MQ=255) tAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTc > 2:1794038/1‑150 (MQ=255) tacctgggCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCg > 2:2484385/6‑150 (MQ=255) tacctgggCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCg > 2:2483958/6‑150 (MQ=255) aGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCg > 1:1689041/1‑150 (MQ=255) gCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGt > 1:2690013/1‑150 (MQ=255) gCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGt > 1:412801/1‑150 (MQ=255) aGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTgg > 1:2011829/1‑150 (MQ=255) cagcaAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGt > 1:1137848/1‑150 (MQ=255) agcaAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTg > 1:4988803/1‑150 (MQ=255) gTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGc < 2:1856333/150‑1 (MQ=255) gTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGc > 2:1371283/1‑150 (MQ=255) aGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCt < 2:4307360/150‑1 (MQ=255) gCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTACCTCTCGGCTAGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGGGAAGGCCTGCAGGCTa > 2:3503486/1‑150 (MQ=255) ccTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTAt < 1:3663515/150‑1 (MQ=255) ccTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGGTCGTTGGCGGTGAAGGCCTGCAGGCTAt > 2:720913/1‑150 (MQ=255) cTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATc > 2:709430/1‑150 (MQ=255) tCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATcc > 2:1175682/1‑150 (MQ=255) tCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATcc > 1:2086913/1‑150 (MQ=255) tCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGGTCGTTGGCGGTGAAGGCCTGCAGGCTATcc > 2:3633288/1‑150 (MQ=255) gCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTggg < 1:4569385/150‑1 (MQ=255) aCTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGgcg > 2:3964359/1‑150 (MQ=255) aCTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGgcg > 1:1537107/1‑150 (MQ=255) tGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCa > 2:1501792/1‑150 (MQ=255) tCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAAc > 1:165516/1‑150 (MQ=255) ggCGGAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCGTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTtctc < 2:5279745/150‑1 (MQ=255) gCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCg < 2:2011829/150‑1 (MQ=255) gCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCg < 2:344322/150‑1 (MQ=255) ccATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTa > 2:4039219/1‑150 (MQ=255) cATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTAc > 1:4758159/1‑150 (MQ=255) tCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCg < 2:4260738/150‑1 (MQ=255) cTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCgg > 1:2621976/1‑150 (MQ=255) tGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGc > 1:730657/1‑150 (MQ=255) tGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGc > 2:4143158/1‑150 (MQ=255) ggCTCGAATTTCGCCCCCAGCTCCCGCTCGGCTTGCATCAGCAGGTCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGc < 2:1917837/149‑1 (MQ=255) gCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGcc > 1:3720596/1‑150 (MQ=255) gCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGcc > 1:978286/1‑150 (MQ=255) cTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCt < 1:894775/108‑1 (MQ=255) cTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCt > 2:894775/1‑108 (MQ=255) cTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCa > 1:3449127/1‑150 (MQ=255) cTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCa < 2:278303/150‑1 (MQ=255) cTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCa < 1:5062841/150‑1 (MQ=255) tCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAg > 1:1835636/1‑150 (MQ=255) ttCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTc > 2:3263639/1‑150 (MQ=255) ttCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCAAGCTGGCcggcga > 1:5170328/1‑66 (MQ=39) gCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGGTCGTTGGCGGTGAAGGCCTGCGGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTctgg > 1:2512410/1‑147 (MQ=255) ccccAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGc > 2:1325279/1‑150 (MQ=255) ccccAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGc > 2:5386703/1‑150 (MQ=255) cccAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCg > 1:4018242/1‑150 (MQ=255) cccAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCg < 1:4336353/150‑1 (MQ=255) ccAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCgg > 1:2333480/1‑150 (MQ=255) aGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGcc > 1:3008940/1‑150 (MQ=255) ccGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGcc > 2:2213024/1‑79 (MQ=255) ccGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGgc < 1:3180477/101‑1 (MQ=255) ccGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGgc > 2:3180477/1‑101 (MQ=255) cGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAAc > 1:1556238/1‑150 (MQ=255) gCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACt > 2:444824/1‑150 (MQ=255) gCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACt < 1:5319707/150‑1 (MQ=255) tCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGt > 2:5229101/1‑150 (MQ=255) ttGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGtt > 2:1307029/1‑150 (MQ=255) ttGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGtt < 2:5395679/150‑1 (MQ=255) cagcagcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGc < 2:3008940/150‑1 (MQ=255) cagcagcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGc < 1:2250907/150‑1 (MQ=255) agcagcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGcc > 2:4989972/1‑150 (MQ=255) gcagcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGc > 1:3753682/1‑130 (MQ=255) gcagcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGc < 2:3753682/130‑1 (MQ=255) gcagcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCGGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCt > 2:5213685/1‑150 (MQ=255) cagcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGctg < 2:3173138/69‑3 (MQ=255) cagcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGctg > 1:3173138/1‑67 (MQ=255) agcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTcc < 1:179925/150‑1 (MQ=255) agcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTACCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTcc > 1:3932181/1‑150 (MQ=255) gcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGcgacaa < 2:723998/150‑6 (MQ=255) gcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCa > 2:1053089/1‑150 (MQ=255) gcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCa > 1:1830222/1‑150 (MQ=255) gcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCa > 1:4372426/1‑150 (MQ=255) cagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCAt < 1:5434469/150‑1 (MQ=255) agGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATg > 2:5223617/1‑150 (MQ=255) gggCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATgg < 1:5282143/150‑1 (MQ=255) ggCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCAt < 2:549618/147‑1 (MQ=255) ggCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCAt > 1:549618/1‑147 (MQ=255) ggCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATggc > 2:1950963/1‑150 (MQ=255) ggCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATggc > 2:1705451/1‑150 (MQ=255) ggCTGGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATggc > 1:5321979/1‑150 (MQ=255) gctggccGCCGGCAAGCTGGCCGGCGACCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCt > 1:2146430/7‑120 (MQ=255) ggTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCt < 2:154219/150‑1 (MQ=255) tCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTgg > 2:2681691/1‑150 (MQ=255) tCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCACGGCGACGCCCTgc < 1:2225491/150‑2 (MQ=255) ccGCCGGCAAGCTGGCCGGCGACCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTa < 1:4479282/90‑1 (MQ=39) cGCCGGCAAGCTGGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTg > 1:1012357/1‑124 (MQ=255) gCCGGCAAGCTGGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGgcg > 1:1260475/1‑150 (MQ=255) ggCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAg > 1:5065726/1‑150 (MQ=255) | GCCCCAGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGG > NC_002947/654253‑654548 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |