| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 703,025 | T→C | 5.6% | intergenic (+19/‑240) | PP_5SD → / → PP_0598 | 5S ribosomal RNA/paraquat‑inducible protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 703,025 | 0 | T | C | 5.6% | 417.6 / 10.1 | 142 | intergenic (+19/‑240) | PP_5SD/PP_0598 | 5S ribosomal RNA/paraquat‑inducible protein A |
| Reads supporting (aligned to +/- strand): ref base T (67/67); new base C (5/3); total (72/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.06e-01 | |||||||||||
Only 100 of 142 total aligned reads displayed.
ACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAGGGGCG > NC_002947/702912‑703173 | caccTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGaaa < 2:517560/150‑1 (MQ=32) caccTGATCCCATCCCGAACTCAATAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGaaa < 2:4285533/150‑1 (MQ=17) accTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGaaaa > 2:3237736/1‑150 (MQ=32) ccTGATCCCATCCCGAACTCAGTAGTGAAAAGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTATGGGTTTTGTCTTTGGTGGGaaaaa > 1:169332/1‑150 (MQ=17) tGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGaaaaaaa > 1:3375543/1‑150 (MQ=32) gATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAAc < 2:504060/150‑1 (MQ=32) atcccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACt < 2:2556147/150‑1 (MQ=33) atcccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACt < 2:2466395/150‑1 (MQ=33) tcccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTg < 1:1052932/150‑1 (MQ=33) ccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGa > 2:2324651/1‑150 (MQ=33) ccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGa > 1:2030737/1‑150 (MQ=33) ccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGGGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGa > 1:12532/1‑150 (MQ=18) catcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGaa > 2:1098830/1‑150 (MQ=33) catcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGGGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGaa > 1:4338326/1‑150 (MQ=18) atcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGGGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAAc > 1:947141/1‑150 (MQ=18) cGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGTGGTTTCACCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACACCTATCAGCGCATGAAGGTAGGGGTTTTGTATTTGGTGGGAAAAAAACTGGAAATGCt > 1:5320719/1‑150 (MQ=11) gAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAGGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTc < 1:260585/150‑1 (MQ=18) gAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTc < 1:2954270/150‑1 (MQ=33) aCTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGa < 1:982464/150‑1 (MQ=33) aCTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGa < 1:353626/150‑1 (MQ=33) tCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAAt > 1:2251855/1‑150 (MQ=33) tCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAAt > 1:225085/1‑150 (MQ=33) agtagtGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCa < 1:1834159/150‑1 (MQ=33) tagtGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACt < 2:3859376/150‑1 (MQ=33) tGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAACTGGAACTGCTCGAATCACTGCg < 1:4218846/150‑1 (MQ=14) tGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCg < 2:3144628/150‑1 (MQ=33) tGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCg > 2:2346423/1‑150 (MQ=33) aaCGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGa < 2:2396260/150‑1 (MQ=33) aaCGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGa < 2:5125233/150‑1 (MQ=33) aaCGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGa < 1:4437579/150‑1 (MQ=33) aCGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAg > 2:2380224/1‑150 (MQ=33) tGCATCGCCGATGGGAGTGGGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCAGGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGga < 2:1976259/150‑1 (MQ=16) aTCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGaaaaaaa < 2:4367266/116‑1 (MQ=32) aTCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGAt < 1:4122702/150‑1 (MQ=33) tCGGCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTGTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATg > 1:2521700/1‑150 (MQ=18) tCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATg > 1:2547260/1‑150 (MQ=33) tCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATg < 2:672102/150‑1 (MQ=33) tAGTGTGGGGTTTCCCCATGTGAGAGTATGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGcaa > 2:1573335/1‑148 (MQ=18) tAGTGTGGGGTTTCCCCATGTGAGAGTATGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGcaa < 1:1573333/150‑3 (MQ=18) tAGTGTGGGGTTTCCCCATGTGAGAGTATGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGcaa < 1:1573234/150‑3 (MQ=18) tAGTGTGGGGTTTCCCCATGTGAGAGTATGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGcaa > 2:1573234/1‑148 (MQ=18) gtgtGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTg < 1:2190286/150‑1 (MQ=33) tgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCg > 2:1977031/1‑150 (MQ=33) tgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCg > 1:2318648/1‑150 (MQ=33) tgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCg > 1:2064142/1‑150 (MQ=33) tgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCg > 2:3478408/1‑150 (MQ=33) tgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTCCGGGAGCGGAGATGGCACCGGCGTTGCCg > 1:4780890/1‑150 (MQ=18) ggggTTTCCGCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCTCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTGTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCgg > 2:3517098/1‑150 (MQ=16) gggTTTCCCCATGTGAGAGTAGGTCATCGTCAATATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACt < 1:4505774/100‑1 (MQ=25) cccATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCTCCGGCGTTGCCGGTGTTTGCg > 2:2293838/1‑150 (MQ=25) cccATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGACACCGGCAACGCCGgtgccatct < 1:5177505/150‑7 (MQ=11) cccATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGACACCGGCAACGCCGgtgccatct < 1:5177217/150‑7 (MQ=11) ccATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTTGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCgg < 1:1327179/150‑1 (MQ=25) ccATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCgg < 1:909790/150‑1 (MQ=35) ccATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCgg < 1:1298131/150‑1 (MQ=35) tgtgAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTa > 2:140103/1‑150 (MQ=35) tgtgAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGAAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGTGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTa > 2:140038/1‑150 (MQ=25) gtgAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTaa > 2:2865183/1‑150 (MQ=35) gagaGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGTCACCGGCGTTGCCGGTGTTTGCGGGTAAAc < 1:4526834/150‑1 (MQ=25) agagTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAAcc < 2:911062/150‑1 (MQ=35) agagTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAAcc < 2:2030737/150‑1 (MQ=35) gTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGc < 2:3872234/150‑1 (MQ=35) tAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCt < 2:4360225/150‑1 (MQ=35) tAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCt < 2:2592802/150‑1 (MQ=35) gTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGTGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCt > 2:921910/1‑150 (MQ=25) cATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTAc > 1:1244382/1‑150 (MQ=35) cGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAg < 1:2324651/150‑1 (MQ=37) aaGATTCATTTCGCAAATCCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTTTTTGCGGGTAAACCCGCTCCTACAAGGGAt < 2:745062/150‑1 (MQ=255) aaGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGAt < 1:5336925/150‑1 (MQ=40) aGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATg > 1:1185305/1‑150 (MQ=40) gATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATgg > 2:2309898/1‑150 (MQ=255) gATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATgg < 2:3218691/150‑1 (MQ=255) gATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATgg < 2:2251855/150‑1 (MQ=255) ttCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGt > 1:817681/1‑150 (MQ=255) ttCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGt < 1:1010570/150‑1 (MQ=255) ttCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGGTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGt < 2:15168/150‑1 (MQ=255) tCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTg < 1:5426214/150‑1 (MQ=255) tttCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCaa > 1:5273139/1‑150 (MQ=255) tttCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCaa > 2:1404353/1‑150 (MQ=255) tttCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTGTGGGGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGCGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACCAGGGATGGGTGCac > 2:1796236/1‑149 (MQ=255) agacAAAACCCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACg > 2:4506325/4‑150 (MQ=17) gCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACGGCTCGAATCACTGCGGGAGCGGCGATGGCACCGGCGGTGCCGGTGTTTGCGGGTAAACCCGCTCCTCCAAGGGATGGGGGCAACGcc > 2:2887277/1‑150 (MQ=14) cAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCca < 1:3517098/150‑1 (MQ=255) aaaaCCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCcag > 2:1843957/1‑150 (MQ=255) aCCCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAg > 1:272087/1‑129 (MQ=11) aCCCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAg > 1:272148/1‑129 (MQ=11) aCCCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAg < 2:272087/129‑1 (MQ=11) aCCCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAg < 2:272148/129‑1 (MQ=11) aCCCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAg > 1:272114/1‑129 (MQ=11) cccTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGgtgt > 1:2689497/1‑102 (MQ=35) cccTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGgtgt < 2:2689497/102‑1 (MQ=35) cccTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGgtgt > 1:2689466/1‑102 (MQ=35) cccTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGgtgt < 2:2689466/102‑1 (MQ=35) cccTATCTGCGCATGCAGGTAGGGGTGTTGTCTTTGGTGGGAAAAAAACTGGAACTGCGCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACACGGGATGGGTGCAACGCcaggcagg > 2:4870597/1‑150 (MQ=255) cTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAgggg > 1:1128542/1‑150 (MQ=255) cTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAgggg > 1:4979935/1‑150 (MQ=255) tATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAAccc > 1:298313/1‑113 (MQ=38) tATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAAccc < 2:298313/113‑1 (MQ=38) aTCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAGGGgcg > 1:5381900/1‑150 (MQ=255) aTCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGATCCTACAAGGGATGGGTGCAACGCCAGGCAGGGgcg > 1:3194212/1‑150 (MQ=255) | ACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAGGGGCG > NC_002947/702912‑703173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |