Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 703,030 | G→A | 5.5% | intergenic (+24/‑235) | PP_5SD → / → PP_0598 | 5S ribosomal RNA/paraquat‑inducible protein A |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 703,030 | 0 | G | A | 5.5% | 425.3 / 10.4 | 145 | intergenic (+24/‑235) | PP_5SD/PP_0598 | 5S ribosomal RNA/paraquat‑inducible protein A |
Reads supporting (aligned to +/- strand): ref base G (69/68); new base A (5/3); total (74/71) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.19e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.54e-01 |
Only 100 of 147 total aligned reads displayed.
ACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAGGGGCGCACCCC > NC_002947/702912‑703179 | ccaccTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGaa > 2:2316030/1‑150 (MQ=31) caccTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGaaa < 2:517560/150‑1 (MQ=32) ccTGATCCCATCCCGAACTCAGTAGTGAAAAGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTATGGGTTTTGTCTTTGGTGGGaaaaa > 1:169332/1‑150 (MQ=17) tGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGaaaaaaa > 1:3375543/1‑150 (MQ=32) gATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAAc < 2:504060/150‑1 (MQ=32) atcccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACt < 2:2466395/150‑1 (MQ=33) atcccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACt > 2:2615074/1‑150 (MQ=33) tcccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTg < 1:1052932/150‑1 (MQ=33) ccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGa > 2:2324651/1‑150 (MQ=33) ccatcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGa > 1:2030737/1‑150 (MQ=33) catcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGaa > 2:1098830/1‑150 (MQ=33) catcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGGGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGaa > 1:4338326/1‑150 (MQ=18) tcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACt > 1:4532099/1‑150 (MQ=33) cGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGTGGTTTCACCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACACCTATCAGCGCATGAAGGTAGGGGTTTTGTATTTGGTGGGAAAAAAACTGGAAATGCt > 1:5320719/1‑150 (MQ=11) gAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTc < 1:2954270/150‑1 (MQ=33) gAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTc < 2:2276785/150‑1 (MQ=33) aCTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGa < 1:353626/150‑1 (MQ=33) aCTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGa < 1:982464/150‑1 (MQ=33) tCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAAt > 1:225085/1‑150 (MQ=33) tCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAAt > 1:2251855/1‑150 (MQ=33) agtagtGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCa < 1:1834159/150‑1 (MQ=33) tagtGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACt < 2:3859376/150‑1 (MQ=33) tGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGCAAAAAACTGGAACTGCTCGAATCACTGCg < 1:4218846/150‑1 (MQ=14) tGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCg < 2:3144628/150‑1 (MQ=33) aaCGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGa < 1:4437579/150‑1 (MQ=33) aaCGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGa < 2:5125233/150‑1 (MQ=33) aCGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAg > 2:2380226/1‑150 (MQ=33) aCGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAg > 2:2380224/1‑150 (MQ=33) aTCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGAt < 1:4122702/150‑1 (MQ=33) aTCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGAt > 1:2528895/1‑150 (MQ=33) tCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATg > 1:2547260/1‑150 (MQ=33) tCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATg < 2:672102/150‑1 (MQ=33) tAGTGTGGGGTTTCCCCATGTGAGAGTATGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGcaa > 2:1573335/1‑148 (MQ=18) tAGTGTGGGGTTTCCCCATGTGAGAGTATGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGcaa > 2:1573333/1‑148 (MQ=18) tAGTGTGGGGTTTCCCCATGTGAGAGTATGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGcaa < 1:1573234/150‑3 (MQ=18) tAGTGTGGGGTTTCCCCATGTGAGAGTATGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGcaa < 1:1573333/150‑3 (MQ=18) tAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGt > 1:911062/1‑150 (MQ=33) gtgtGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTg > 1:270353/1‑150 (MQ=33) gtgtGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTg < 1:5224317/150‑1 (MQ=33) tgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCg > 2:3478408/1‑150 (MQ=33) tgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCg > 2:1977031/1‑150 (MQ=33) tgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCg > 2:1976950/1‑150 (MQ=33) tgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCg > 1:2318648/1‑150 (MQ=33) tgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCg > 1:2064142/1‑150 (MQ=33) tgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTCCGGGAGCGGAGATGGCACCGGCGTTGCCg > 1:4780890/1‑150 (MQ=18) ggggTTTCCGCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCTCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTGTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCgg > 2:3517098/1‑150 (MQ=16) gggTTTCCCCATGTGAGAGTAGGTCATCGTCAATATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACt < 1:4505774/100‑1 (MQ=25) gggTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAATCt > 2:4505774/1‑100 (MQ=18) cccATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGACACCGGCAACGCCGgtgccatct < 1:5177505/150‑7 (MQ=11) ccATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTTGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCgg < 1:1327179/150‑1 (MQ=25) ccATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCgg < 1:909790/150‑1 (MQ=35) ccATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCgg < 1:2199495/150‑1 (MQ=35) ccATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCgg < 1:1298131/150‑1 (MQ=35) cATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCggg < 2:495844/150‑1 (MQ=35) tgtgAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTa > 2:140103/1‑150 (MQ=35) tgtgAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGAAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGTGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTa > 2:140038/1‑150 (MQ=25) gtgAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTaa > 2:2865183/1‑150 (MQ=35) agagTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAAcc < 2:911062/150‑1 (MQ=35) gTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGc < 2:2547260/150‑1 (MQ=35) gTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGc < 2:3872234/150‑1 (MQ=35) tAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCt < 2:4360223/150‑1 (MQ=35) tAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCt < 2:2592802/150‑1 (MQ=35) tAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCt < 2:4360225/150‑1 (MQ=35) gTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGTGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCt > 2:921910/1‑150 (MQ=25) cATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTAc > 1:1244382/1‑150 (MQ=35) cGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAg < 1:2324651/150‑1 (MQ=37) aaGATTCATTTCGCAAATCCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTTTTTGCGGGTAAACCCGCTCCTACAAGGGAt < 2:745062/150‑1 (MQ=255) aaGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGAt < 1:5336925/150‑1 (MQ=40) aaGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGAt > 2:3350715/1‑150 (MQ=40) aGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATg > 1:1185305/1‑150 (MQ=40) gATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATgg < 2:2251855/150‑1 (MQ=255) gATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATgg > 2:1813848/1‑150 (MQ=255) gATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATgg > 2:2309898/1‑150 (MQ=255) gATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATgg < 2:3218691/150‑1 (MQ=255) ttCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGt > 1:817681/1‑150 (MQ=255) ttCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGt < 1:1010570/150‑1 (MQ=255) ttCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGt < 1:5166243/150‑1 (MQ=255) ttCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGGTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGt < 2:15168/150‑1 (MQ=255) tCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTg < 1:5426214/150‑1 (MQ=255) tttCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCaa > 2:1404353/1‑150 (MQ=255) tttCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCaa > 1:2738515/1‑150 (MQ=255) agacAAAACCCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACg > 2:4506325/4‑150 (MQ=17) gCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACGGCTCGAATCACTGCGGGAGCGGCGATGGCACCGGCGGTGCCGGTGTTTGCGGGTAAACCCGCTCCTCCAAGGGATGGGGGCAACGcc > 2:2887277/1‑150 (MQ=14) cAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCca < 1:3517098/150‑1 (MQ=255) aaaaCCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCcag > 2:1843957/1‑150 (MQ=255) aCCCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAg > 1:272148/1‑129 (MQ=11) aCCCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAg > 1:272087/1‑129 (MQ=11) aCCCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAg < 2:272148/129‑1 (MQ=11) aCCCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAg < 2:272087/129‑1 (MQ=11) cccTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGgtgt < 2:2689497/102‑1 (MQ=35) cccTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGgtgt > 1:2689466/1‑102 (MQ=35) ccTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAggg > 1:1250688/1‑150 (MQ=255) cTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAgggg > 1:4979935/1‑150 (MQ=255) cTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAgggg < 1:2615074/150‑1 (MQ=255) cTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAgggg > 1:1128542/1‑150 (MQ=255) tATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAAccc > 1:298313/1‑113 (MQ=38) tATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAAccc < 2:298313/113‑1 (MQ=38) aTCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAGGGgcg > 1:5381900/1‑150 (MQ=255) aTCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGATCCTACAAGGGATGGGTGCAACGCCAGGCAGGGgcg > 1:3194212/1‑150 (MQ=255) gcATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAGGGGCGCAcccc < 1:1229509/150‑1 (MQ=255) | ACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGGTGGGAAAAAAACTGGAACTGCTCGAATCACTGCGGGAGCGGAGATGGCACCGGCGTTGCCGGTGTTTGCGGGTAAACCCGCTCCTACAAGGGATGGGTGCAACGCCAGGCAGGGGCGCACCCC > NC_002947/702912‑703179 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |