| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 812,056 | G→A | 5.0% | L67L (CTG→TTG) | PP_0698 ← | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 812,056 | 0 | G | A | 5.0% | 566.4 / 11.8 | 178 | L67L (CTG→TTG) | PP_0698 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (83/86); new base A (3/6); total (86/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 182 total aligned reads displayed.
CATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTCGGTC > NC_002947/811909‑812204 | aTGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGc > 2:5328525/1‑150 (MQ=255) aTGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGc > 2:5060051/1‑150 (MQ=255) ggAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCAc < 1:1116557/150‑1 (MQ=255) ggAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCAc < 1:1116459/150‑1 (MQ=255) ggAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCAc < 1:2254908/150‑1 (MQ=255) gAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACg > 2:4185419/1‑150 (MQ=255) gAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTCGTGCCCTGCAAGGCAcc < 1:1373853/150‑2 (MQ=255) gcgcGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGAcc > 1:435258/1‑150 (MQ=255) cgcgGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTCGTGCCCTGCAAGGCaccaccc < 1:5034441/150‑2 (MQ=255) ggCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCGGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACcggcg > 2:1386093/1‑150 (MQ=255) ggCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACcggcg > 2:3643890/1‑150 (MQ=255) ggCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTCGTGCCCTGCAAGGCaccacccagg < 2:598174/150‑5 (MQ=255) gCAGGCGCGGGCTCAGCCAGCGCATGGCGCTGGTCGGTTCGCAAGACCGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGGTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTTGGTGGTGCCTTGCAGGGCACGACcggcgg < 1:4288964/150‑1 (MQ=255) cAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCggg < 2:2118487/150‑1 (MQ=255) gcgGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGa < 2:248120/150‑1 (MQ=255) gcgGGATCAGCCAGCGCAGGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGa < 2:2922444/150‑1 (MQ=255) cgGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAg < 1:1257872/150‑1 (MQ=255) gccagcGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATgg > 2:1339346/1‑150 (MQ=255) gccagcGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATgg > 2:3265376/1‑150 (MQ=255) gccagcGCATGGCGATGGGCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATgg > 2:5372202/1‑150 (MQ=255) ccagcGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGc > 1:4246920/1‑150 (MQ=255) gcgcATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGTCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCg < 2:49960/150‑1 (MQ=255) gcATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGt > 1:2531499/1‑150 (MQ=255) ggCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTgcg < 2:2895798/150‑1 (MQ=255) ggCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTgcg > 1:1828142/1‑150 (MQ=255) ggCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTgcg < 1:864070/150‑1 (MQ=255) ggCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTgcg > 1:1895352/1‑150 (MQ=255) gCGATGGTCGGGTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTgcgg < 2:4356433/150‑1 (MQ=255) ggTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTc < 2:1811469/150‑1 (MQ=255) tCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCCGGCAAGGcaccac > 2:3442151/1‑111 (MQ=255) ggTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGGTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAAc < 1:3849875/150‑1 (MQ=255) cGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGtt > 1:595770/1‑150 (MQ=255) cGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGtt > 1:5345465/1‑150 (MQ=255) gCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGACCAGTTc < 2:712693/150‑1 (MQ=255) aaGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCggg > 1:3278268/1‑109 (MQ=255) aaGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCggg < 2:3278245/109‑1 (MQ=255) aaGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTCGTGCCCTGCAAGGCaccacccag < 2:832899/106‑4 (MQ=39) gACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACg > 1:1218769/1‑150 (MQ=255) ccagcacATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGc > 1:3372398/1‑150 (MQ=255) cagcacATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCt > 1:353984/1‑150 (MQ=255) cagcacATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCt > 1:8211/1‑150 (MQ=255) gcacATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCttt > 1:2125152/1‑150 (MQ=255) gcacATTGTCGCGAGCTTGTTGCCGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCttt > 2:1260966/1‑150 (MQ=255) cacaTTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTttc < 2:4948803/150‑1 (MQ=255) cacaTTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTttc > 1:3729202/1‑150 (MQ=255) aTTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGGGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTttcttc < 2:3770424/150‑1 (MQ=255) tGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCca < 2:3498971/150‑1 (MQ=255) gcgAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCcagcag > 1:1165810/1‑150 (MQ=255) gAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGc < 1:28950/150‑1 (MQ=255) gAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGc > 1:1784900/1‑150 (MQ=255) ttgttgCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTAt > 1:4032367/1‑150 (MQ=255) ttgttgCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTAt > 1:4032203/1‑150 (MQ=255) ttgttgCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTAt > 2:2054000/1‑150 (MQ=255) tgttgCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTAtt < 1:3920686/150‑1 (MQ=255) gttgCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTAttt > 1:3146393/1‑150 (MQ=255) ttgCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTg > 2:3991923/1‑150 (MQ=255) tgctgcAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTgg < 1:2778943/150‑1 (MQ=255) tgctgcAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTgg < 1:2778947/150‑1 (MQ=255) tgctgcAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTgg < 1:753286/150‑1 (MQ=255) gctgcAGGCGCTGCACGGCGCCTTCGAGCTGTTCGATGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTggc > 2:463344/1‑150 (MQ=255) gctgcAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTggc < 2:1639119/150‑1 (MQ=255) ctgcAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTggcg > 2:3375848/1‑150 (MQ=255) tgcAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTggcgg > 1:452323/1‑150 (MQ=255) tgcAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTggcgg > 1:4940899/1‑150 (MQ=255) tgcAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTggcgg > 1:4987588/1‑150 (MQ=255) ggCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGa > 1:2576158/1‑150 (MQ=255) tGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCATTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACcgcg > 1:3583856/1‑150 (MQ=255) aCGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGtt > 1:2986641/1‑91 (MQ=255) aCGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTttctt < 2:5188/118‑1 (MQ=255) gcCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCgtgagt > 1:1583164/1‑150 (MQ=255) gcCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCgtgagt < 1:4734980/150‑1 (MQ=255) cTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTCTTTGGCGGCTGACCGCGCCgtgagtga > 1:202562/1‑150 (MQ=255) cTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCgtgagtga < 2:2369756/150‑1 (MQ=255) cTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCgtgagtga < 2:3702461/150‑1 (MQ=255) ttCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGAc > 1:3095674/1‑150 (MQ=255) gAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTg < 1:5428439/150‑1 (MQ=255) aGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGc > 2:3249237/1‑150 (MQ=255) acagctCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCa > 2:723991/6‑150 (MQ=255) tGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAg < 2:2499078/150‑1 (MQ=255) ttCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTg > 1:3835335/1‑150 (MQ=255) ttCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTg > 1:4617193/1‑150 (MQ=255) cGAAGATCGCCTGGGTGGTGCCTTGCAAGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCt > 2:141710/1‑150 (MQ=255) gAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCcagca > 2:4811555/1‑104 (MQ=255) gAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCgtga < 2:3131288/133‑1 (MQ=255) aaGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTcg > 1:2054344/1‑150 (MQ=255) aaGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTcg > 2:4168480/1‑150 (MQ=255) aGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTcgg < 2:4246920/150‑1 (MQ=255) aTCGCCTGGGTGGTGACTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTcggcg > 2:2059068/1‑150 (MQ=255) tCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTc < 1:3252536/67‑1 (MQ=255) gCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGgcggcg > 2:4029078/1‑150 (MQ=255) ccTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGgcgc < 2:1895352/150‑1 (MQ=255) ccTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGgcgc < 2:2497039/150‑1 (MQ=255) gggTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCa < 2:1229635/150‑1 (MQ=255) gtgCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAg > 2:5041764/1‑150 (MQ=255) tgCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGc > 1:34286/1‑150 (MQ=255) cTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGctct < 2:1072414/150‑1 (MQ=255) cTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGctct < 1:2942662/150‑1 (MQ=255) cTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGctct < 2:1072329/150‑1 (MQ=255) ttGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGCtctc < 2:4940899/150‑1 (MQ=255) aGGGCACGACCGGCGGGGGTGAGGAACATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTCGGTc > 2:1931565/1‑150 (MQ=255) | CATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAATGGCCCGGTTGCGGCGTTCGAACAGTTCCACGCCAAGGCTTTCTTCCAGCAGGCGTATTTGGCGGCTGACCGCGCCGTGAGTGACGTGCAAGTGCTCGGCGGCGCGCACGAAGCTCTCGGTC > NC_002947/811909‑812204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |