| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 901,421 | G→A | 5.4% | intergenic (‑137/‑194) | cysZ ← / → trxB | sulfate transport protein CysZ/thioredoxin reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 901,421 | 0 | G | A | 5.4% | 586.8 / 14.6 | 186 | intergenic (‑137/‑194) | cysZ/trxB | sulfate transport protein CysZ/thioredoxin reductase |
| Reads supporting (aligned to +/- strand): ref base G (85/91); new base A (6/4); total (91/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
Only 100 of 189 total aligned reads displayed.
CAGGGGCTTGCATCTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTTGGCTGGCGCAGCC > NC_002947/901272‑901569 | cAGGGGCTTGCATCTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCg > 2:3716986/1‑150 (MQ=255) ggggCTTGCATCTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGAt < 2:3599096/150‑1 (MQ=255) ggggCTTGCATCTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGAt < 2:2710880/150‑1 (MQ=255) gggCTTGCATCTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATg < 2:4087903/150‑1 (MQ=255) gCTTGCATCTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGcc < 1:5284978/150‑1 (MQ=255) ttGCATCTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTa > 2:1881860/1‑150 (MQ=255) gCATCTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACCAAAGGCACGCCGTGGGCGGGAAACGGTATTTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATg < 2:4822370/150‑1 (MQ=255) cATCTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGTATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGa < 1:5082051/150‑1 (MQ=255) cATCTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGa < 2:2191570/150‑1 (MQ=255) tCTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAgg > 1:868751/1‑150 (MQ=255) cTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGt > 1:3316974/1‑150 (MQ=255) cTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGt < 2:1982291/150‑1 (MQ=255) cTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCGGGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGt > 1:50580/1‑150 (MQ=255) cTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTGACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGt < 2:2503160/150‑1 (MQ=255) gagaCTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGa > 1:4380390/1‑150 (MQ=255) gagaCTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTGGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGa > 1:1071895/1‑150 (MQ=255) gaCTCCGCAGATAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGAtt < 1:995106/150‑1 (MQ=255) cTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCGGCATAGGCGATGCCTATGAGGTGGATTGt < 2:3435065/150‑1 (MQ=255) ccGCAGAGAAGGAAAACGCGCGGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCt < 1:3229896/150‑1 (MQ=255) gCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCTTGGTCGGGAAACGGGATGTAAAAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTaa < 2:4431599/150‑1 (MQ=255) gCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTaa > 1:4503490/1‑150 (MQ=255) gCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTaa < 2:4188056/150‑1 (MQ=255) gCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTaa < 2:4498571/150‑1 (MQ=255) cAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAg < 2:5245316/150‑1 (MQ=255) gaAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGata > 1:2322775/1‑150 (MQ=255) aaGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGatat > 1:3057199/1‑150 (MQ=255) aGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCGTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATAtt > 1:3925066/1‑150 (MQ=255) ggAAATCGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATAttt > 2:4997515/1‑150 (MQ=255) gAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTc > 2:1777502/1‑150 (MQ=255) aaaCGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCt > 2:2814555/1‑150 (MQ=255) aaaCGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCt > 2:626731/1‑150 (MQ=255) cgcgCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTaa < 1:2227399/150‑1 (MQ=255) cgcTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATc < 1:3304513/150‑1 (MQ=255) tGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCttt < 1:4835668/150‑1 (MQ=255) cGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGAtt < 2:3884426/116‑1 (MQ=255) gCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGt > 2:2128722/1‑150 (MQ=255) gcgcCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTgcg < 2:3668955/150‑1 (MQ=255) gacgaAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCaa > 1:3386222/1‑150 (MQ=255) acgaAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCttt > 1:1784694/1‑125 (MQ=255) acgaAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCttt < 2:1784694/125‑1 (MQ=255) gaAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACtt > 1:4918812/1‑150 (MQ=255) aaGGCACGCCGTGGTCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGAGTGTCTAAGGATATTTCCTTAATATTTGCGACCTCGCTACAGTGCGCTCAACtttt > 2:3826837/1‑150 (MQ=255) cGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCttt > 1:1977418/1‑150 (MQ=255) cGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCttt > 2:2083903/1‑150 (MQ=255) ccGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGc < 1:272003/150‑1 (MQ=255) gTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCgg < 2:1231045/150‑1 (MQ=255) atGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCgg < 1:4480306/149‑1 (MQ=255) gggCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGc < 1:5000677/150‑1 (MQ=255) gggAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTgc > 1:2886723/1‑150 (MQ=255) ggAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTgcg > 1:4186002/1‑150 (MQ=255) gAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTCCAGTGCGCTCAACTTTTCGCTTTGCGGGCCTgcgc > 2:2934656/1‑150 (MQ=255) gAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTgcgc < 1:5441496/150‑1 (MQ=255) gAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTgcgc < 1:51143/150‑1 (MQ=255) cGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGttt > 1:4930778/1‑150 (MQ=255) ggATGTAACAACAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTa < 2:57024/150‑1 (MQ=255) ggATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTa < 2:4744939/150‑1 (MQ=255) ggATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTa < 2:2322775/150‑1 (MQ=255) gATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAg < 2:4918812/150‑1 (MQ=255) tGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGGGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGcc > 2:5331470/1‑150 (MQ=255) gTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCt > 1:533196/1‑150 (MQ=255) aaCAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTc > 1:1520758/1‑150 (MQ=255) aaCAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTc < 2:521598/150‑1 (MQ=255) aaCAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTc > 1:2224695/1‑150 (MQ=255) aaaaGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTcctg > 1:1366675/1‑148 (MQ=255) aaaaGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTcctg > 1:2615588/1‑148 (MQ=255) aaGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCaa > 1:3167911/1‑150 (MQ=255) aaGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCaa > 1:2103266/1‑150 (MQ=255) aGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAg > 1:3046083/1‑150 (MQ=255) gcgcCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGt < 1:1887062/150‑1 (MQ=255) gggCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGt > 2:4072595/1‑150 (MQ=255) cTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTggg < 1:3716986/150‑1 (MQ=255) tGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTc < 2:1603051/150‑1 (MQ=255) tttATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGttt < 2:3507193/121‑1 (MQ=255) tttATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGttt > 1:3507193/1‑121 (MQ=255) ttATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCtt < 1:408815/150‑1 (MQ=255) tCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTctctaga < 2:868751/150‑7 (MQ=255) gATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTaa > 1:4619583/1‑150 (MQ=255) aTGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAAt > 1:2473502/1‑150 (MQ=255) aTGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAAt > 1:192344/1‑150 (MQ=255) tGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAAtt > 1:3605813/1‑150 (MQ=255) gAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTa < 1:4511437/114‑1 (MQ=255) gAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAAtat > 1:3229246/1‑148 (MQ=255) aTCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCtt < 1:1096391/150‑1 (MQ=255) tCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTtg > 2:1153045/1‑150 (MQ=255) tCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTtg < 1:2385369/150‑1 (MQ=255) tCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTtg < 2:3925066/150‑1 (MQ=255) tCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTtg > 2:3417674/1‑150 (MQ=255) cGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTtgg < 1:626731/150‑1 (MQ=255) gcagcaTAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTtggc > 2:1484/1‑150 (MQ=255) cagcaTAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTtggct < 2:1071895/150‑1 (MQ=255) cagcaTAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTtggct < 2:50580/150‑1 (MQ=255) ctcaTAGGCATCGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTa > 2:3172862/3‑106 (MQ=255) ctcaTAGGCATCGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTa < 1:3172862/104‑1 (MQ=255) ctcaTAGGCATCGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCtt > 1:2757089/3‑134 (MQ=255) ctcaTAGGCATCGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTtg < 1:3836683/144‑1 (MQ=255) gCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTTGGCTGGCGCAGc > 1:4294568/1‑150 (MQ=255) cGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTTGGCTGGCGCAGcc < 2:3316979/150‑1 (MQ=255) cGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTTGGCTGGCGCAGcc < 2:3316974/150‑1 (MQ=255) cGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTTGGCTGGCGCAGcc < 2:3101886/150‑1 (MQ=255) cGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTTGGCTGGCGCAGcc < 2:3865885/150‑1 (MQ=255) | CAGGGGCTTGCATCTAGAGACTCCGCAGAGAAGGAAAACGCGCTGACCTTACCGAGTTTGCCGCGCCGACGAAAGGCACGCCGTGGGCGGGAAACGGGATGTAACAAAAGCGCCCGGGGCTTGTTTATCGATGAAATCGCAGCATAGGCGATGCCTATGAGGTGGATTGTCTAAGGATATTTCCTTAATCTTTGCGACCTCGCTACAGTGCGCTCAACTTTTCGCTTTGCGGGCCTGCGCGTTTTAGCCTTCCCCAAGTGCTGCGTGGGTCCTTTTTAATTTCTTGGCTGGCGCAGCC > NC_002947/901272‑901569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |