Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 991,557 G→A 5.9% G59D (GGT→GAT)  der → GTPase Der

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947991,5570GA 5.9% 579.1 / 15.7 186G59D (GGT→GAT) derGTPase Der
Reads supporting (aligned to +/- strand):  ref base G (95/80);  new base A (5/6);  total (100/86)
Fisher's exact test for biased strand distribution p-value = 7.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 195 total aligned reads displayed.

GCCCGAACGTCGGCAAATCCACCATGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGC  >  NC_002947/991410‑991706
                                                                                                                                                   |                                                                                                                                                     
   cGAACGTCGGCAAATCCACCATGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCa                                                                                                                                                  <  1:1244738/150‑1 (MQ=255)
      aCGTCGGCAAATCCACCATGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCg                                                                                                                                               <  1:653106/150‑1 (MQ=255)
          cGGCAAATCCACCATGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGATACCACCGGTgt                                                                                                                                           <  2:5039236/150‑2 (MQ=255)
           ggCAAATCCACCATGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGAc                                                                                                                                          <  1:3556021/150‑1 (MQ=255)
            gCAAATCCACCATGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACg                                                                                                                                         >  2:2082834/1‑150 (MQ=255)
             cAAATCCACCATGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGTCACCGGTGATACCACCGGTGTCGa                                                                                                                                        <  1:1809597/150‑1 (MQ=255)
              aaaTCCACCATGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGTCACCGGTGATACCACCGGTGTCGat                                                                                                                                       <  1:4681003/150‑2 (MQ=255)
              aaaTCCACCATGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGTCACCGGTGATACCACCGGTGTCGat                                                                                                                                       <  2:3375586/150‑2 (MQ=255)
                aTCCACCATGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGTCACCGGTGATACCACCGGTGTCGatca                                                                                                                                     <  1:1411518/150‑4 (MQ=255)
                 tCCACCATGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTg                                                                                                                                    >  1:1514726/1‑150 (MQ=255)
                 tCCACCATGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTg                                                                                                                                    >  2:2945502/1‑150 (MQ=255)
                   caccaTGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTggg                                                                                                                                  >  1:12989/1‑150 (MQ=255)
                   caccaTGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTggg                                                                                                                                  >  2:4313335/1‑150 (MQ=255)
                    accaTGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGc                                                                                                                                 >  2:4987576/1‑150 (MQ=255)
                     ccaTGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCa                                                                                                                                <  1:4987576/150‑1 (MQ=255)
                        tGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATgg                                                                                                                             >  1:3926177/1‑150 (MQ=255)
                        tGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATgg                                                                                                                             <  1:2810473/150‑1 (MQ=255)
                         gTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGa                                                                                                                            >  1:4581266/1‑150 (MQ=255)
                           tCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACg                                                                                                                          >  1:3390711/1‑150 (MQ=255)
                             aaCCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGaa                                                                                                                        >  1:3040249/1‑150 (MQ=255)
                             aaCCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGaa                                                                                                                        >  1:310077/1‑150 (MQ=255)
                             aaCCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGaa                                                                                                                        >  2:5202239/1‑150 (MQ=255)
                             aaCCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGaa                                                                                                                        >  1:1004858/1‑150 (MQ=255)
                              aCCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGGGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGaaa                                                                                                                       <  2:1738525/150‑1 (MQ=255)
                               ccGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGaaaa                                                                                                                      >  1:2820488/1‑150 (MQ=255)
                                 gCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCCGGATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTCTCACCGGTGACGAAGTGGGCAGGGACGaaaaaa                                                                                                                    >  2:3393834/1‑150 (MQ=255)
                                 gCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGaaaaaa                                                                                                                    <  1:4376262/150‑1 (MQ=255)
                                  ccTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAaataat                                                                                                                   >  2:2825555/1‑150 (MQ=255)
                                  ccTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAAt                                                                                                                   <  2:3283751/150‑1 (MQ=255)
                                  ccTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAAt                                                                                                                   <  1:1023838/150‑1 (MQ=255)
                                     gACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTCTGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGc                                                                                                                >  2:5135482/1‑150 (MQ=255)
                                     gACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGc                                                                                                                >  2:2137950/1‑150 (MQ=255)
                                          aGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGc                                                                                                           >  2:753998/1‑150 (MQ=255)
                                             cccGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGt                                                                                                        <  1:1982171/150‑1 (MQ=255)
                                                gcgATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGATACCACCGGt                                                                                                                                             <  1:1540978/110‑1 (MQ=255)
                                                gcgATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGATACCACCGGt                                                                                                                                             >  2:1540978/1‑110 (MQ=255)
                                                  gATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTc                                                                                                   <  1:2137950/150‑1 (MQ=255)
                                                   aTGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCa                                                                                                  >  2:4936430/1‑150 (MQ=255)
                                                     gCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATg                                                                                                <  1:3230422/150‑1 (MQ=255)
                                                        aTCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATgg                                                                                                                             >  2:401490/1‑118 (MQ=255)
                                                        aTCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGcc                                                                                             >  1:3956006/1‑150 (MQ=255)
                                                         tcgtcgGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCa                                                                                            <  1:3891410/150‑1 (MQ=255)
                                                         tcgtcgGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCCGTGGTATCACCGGTGACGAAGTGGGCAGGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCa                                                                                            >  1:1826175/1‑150 (MQ=255)
                                                           gtcgGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCAtt                                                                                          <  2:1004858/150‑1 (MQ=255)
                                                            tcgGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTg                                                                                         >  2:705781/1‑150 (MQ=255)
                                                              ggTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTgaa                                                                                       <  1:4154111/150‑1 (MQ=255)
                                                                 gACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTgaagaa                                                                                    <  2:2681261/150‑1 (MQ=255)
                                                                       tCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGAc                                                                              >  1:1897149/1‑150 (MQ=255)
                                                                       tCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGAc                                                                              <  2:1657918/150‑1 (MQ=255)
                                                                          ggCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCCTTGAAGAAGCCGACTAt                                                                           >  2:3195093/1‑150 (MQ=255)
                                                                           gCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTAtg                                                                          >  1:2854429/1‑150 (MQ=255)
                                                                            ccTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTc                                                                                                   <  2:378252/124‑1 (MQ=255)
                                                                            ccTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTc                                                                                                   >  1:378252/1‑124 (MQ=255)
                                                                            ccTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTAtgt                                                                         <  2:1903812/150‑1 (MQ=255)
                                                                               gACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCt                                                                      >  1:3299181/1‑150 (MQ=255)
                                                                                  ccGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGtt                                                                   >  1:940728/1‑150 (MQ=255)
                                                                                    gTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTcc                                                                 <  1:705781/150‑1 (MQ=255)
                                                                                       aCCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTgg                                                              >  1:4873850/1‑150 (MQ=255)
                                                                                         cGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGtt                                                            >  1:1678156/1‑150 (MQ=255)
                                                                                         cGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGtt                                                            <  2:3926177/150‑1 (MQ=255)
                                                                                          gCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGGATCACCGGTGACGAAGTGGGCATGGACGAAAAAAGGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGtcg                                                           <  1:930665/150‑3 (MQ=255)
                                                                                            cAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGAt                                                         <  2:5364070/150‑1 (MQ=255)
                                                                                              gTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGc                                                       <  2:2329474/150‑1 (MQ=255)
                                                                                                  ggTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGt                                                   >  1:2234825/1‑150 (MQ=255)
                                                                                                    tGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGc                                                 >  2:1577493/1‑150 (MQ=255)
                                                                                                     gATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCg                                                <  1:3336527/150‑1 (MQ=255)
                                                                                                      aTGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCgg                                               <  2:356072/150‑1 (MQ=255)
                                                                                                          cAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTAt                                           >  2:1251975/1‑150 (MQ=255)
                                                                                                          cAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGAAGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGAATATGTGCTGTTCCTGGTTGATGCCCGTGAGGGTAt                                           >  2:2529151/1‑150 (MQ=255)
                                                                                                            gCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGa                                         >  2:1175119/1‑150 (MQ=255)
                                                                                                             cTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGAc                                        <  1:856898/150‑1 (MQ=255)
                                                                                                                  aGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCgg                                   >  1:5426854/1‑150 (MQ=255)
                                                                                                                   gggTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGc                                  <  1:3126106/150‑1 (MQ=255)
                                                                                                                      tCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGa                               <  1:2357831/150‑1 (MQ=255)
                                                                                                                        gTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAACCCCACTATGTGCTGTTCCTGGTTGATGCCCGAGCGGGTATGACTGCGGCAGAcc                             >  1:148030/1‑150 (MQ=255)
                                                                                                                           ccTTCATCCTGATCGACCCCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAACAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTCTGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAga                          <  2:3461891/150‑1 (MQ=255)
                                                                                                                            cTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAgat                         <  1:1777335/150‑1 (MQ=255)
                                                                                                                            cTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAgat                         <  2:686670/150‑1 (MQ=255)
                                                                                                                             ttCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAgatg                        >  1:1281651/1‑150 (MQ=255)
                                                                                                                             ttCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAgatg                        >  1:4082386/1‑150 (MQ=255)
                                                                                                                             ttCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAgatg                        >  2:3315499/1‑150 (MQ=255)
                                                                                                                               cATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAggatcg                      <  2:4530654/150‑6 (MQ=255)
                                                                                                                                 tCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCg                    <  2:3040249/150‑1 (MQ=255)
                                                                                                                                    tGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCg                 <  1:5202239/150‑1 (MQ=255)
                                                                                                                                     gATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGc                                                                                                     >  2:2031295/1‑65 (MQ=255)
                                                                                                                                     gATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGc                                                                                                     <  1:2031295/65‑1 (MQ=255)
                                                                                                                                     gATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGGTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCGGGTGGATGCCCGGGCGGGTCTGACGGCGGCAGACCAGATGATCGCCgc                >  2:3844126/1‑149 (MQ=255)
                                                                                                                                     gATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGa                <  1:4353262/150‑1 (MQ=255)
                                                                                                                                     gATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGa                >  1:2229225/1‑150 (MQ=255)
                                                                                                                                          acacCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCAcc           >  2:1962036/1‑150 (MQ=255)
                                                                                                                                          acacCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCAcc           >  1:1855438/1‑150 (MQ=255)
                                                                                                                                          acacCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCAcc           >  1:788605/1‑150 (MQ=255)
                                                                                                                                           cacCGGTGATACCACCGGTGTCGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCt          >  1:5032243/1‑150 (MQ=255)
                                                                                                                                              cGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTg                                                               >  1:1935691/1‑94 (MQ=255)
                                                                                                                                              cGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTg                                                               <  2:1935691/94‑1 (MQ=255)
                                                                                                                                               ggtggtATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTgcgc      >  1:3010246/1‑150 (MQ=255)
                                                                                                                                                gtgatACCACCGGTGTCGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCCTGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCa     >  2:4210838/1‑150 (MQ=255)
                                                                                                                                                   gtATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGc  <  2:3109594/150‑1 (MQ=255)
                                                                                                                                                   gtATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGc  >  1:4291483/1‑150 (MQ=255)
                                                                                                                                                   gtATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGc  <  1:3332043/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GCCCGAACGTCGGCAAATCCACCATGTTCAACCGCCTGACCAAGACCCGCGATGCCATCGTCGGTGACCTGTCGGGCCTGACCCGTGACCGCCAGTATGGTGATGCCAGCTGGCAGGGTCGTTCCTTCATCCTGATCGACACCGGTGGTATCACCGGTGACGAAGTGGGCATGGACGAAAAAATGGCCGAGCAGTCGCTCATGGCCATTGAAGAAGCCGACTATGTGCTGTTCCTGGTTGATGCCCGTGCGGGTATGACTGCGGCAGACCAGATGATCGCCGAGCACCTGCGCAAGC  >  NC_002947/991410‑991706

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: