BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,004,529	A→T	5.5%	Q184L (CAG→CTG)	PP_0866 →	transmembrane sensor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,004,529	0	A	T	5.5%	622.8 / 16.4	193	Q184L (CAG→CTG)	PP_0866	transmembrane sensor
Reads supporting (aligned to +/- strand): ref base A (101/80); new base T (6/5); total (108/85)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 196 total aligned reads displayed.

GCCGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGATG  >  NC_002947/1004380‑1004678

 ccGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAg                                                                                                                                                      >  2:1921446/1‑150 (MQ=255)

  cGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAgg                                                                                                                                                     >  2:4033609/1‑150 (MQ=255)

        gCTCGCATCTGGTGCTCAATGGCAAGACTCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCAAGTGCGCCTGAACGCTGGTGAAGTGATGTTCATCGTCGCCCATGACAGTAACCGTCCGTTTGTGGTCGACACTGCCCAGGGCAgtg                                                                                                                                               <  2:4837493/150‑1 (MQ=255)

         cTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAgtgg                                                                                                                                              >  1:4632174/1‑149 (MQ=255)

          tCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCCGGGCAGtgtg                                                                                                                                             >  1:3814904/1‑150 (MQ=255)

          tCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGtgtg                                                                                                                                             >  1:876153/1‑150 (MQ=255)

            gCATCTGGAGCTCACTGGCACCACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTGTGTGGTCGACACTGCCCTGGGCAgtgtcga                                                                                                                                           <  2:3895007/150‑4 (MQ=255)

            gCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGAt                                                                                                                                           >  2:1500787/1‑150 (MQ=255)

             cATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATc                                                                                                                                          >  1:561724/1‑150 (MQ=255)

             cATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATc                                                                                                                                          <  2:3482872/150‑1 (MQ=255)

              aTCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCg                                                                                                                                         >  1:373705/1‑150 (MQ=255)

                 tGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTca                                                                                                                                      >  1:5243671/1‑150 (MQ=255)

                  ggAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTcac                                                                                                                                     <  1:1063353/150‑1 (MQ=255)

                   gAGCTCAATGGCACCACGCCGGTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGCAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTcaca                                                                                                                                    <  1:3954189/150‑1 (MQ=255)

                    aGCTCAATGGCAACGCGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAg                                                                                                                                   <  1:1180172/150‑1 (MQ=255)

                       tCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTa                                                                                                                                >  1:4288160/1‑150 (MQ=255)

                         aaTGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTAcc                                                                                                                              >  2:414577/1‑150 (MQ=255)

                         aaTGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTAcc                                                                                                                              >  1:1097577/1‑150 (MQ=255)

                          aTGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTAccc                                                                                                                             <  1:2908275/150‑1 (MQ=255)

                              cAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCtt                                                                                                                         >  1:4958984/1‑150 (MQ=255)

                               aaCACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCttt                                                                                                                        >  2:14054/1‑150 (MQ=255)

                                 cacGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAg                                                                                                                                   <  1:272853/137‑1 (MQ=255)

                                 cacGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAg                                                                                                                                   >  2:272853/1‑137 (MQ=255)

                                  acGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCa                                                                                                                                                  >  1:4855035/1‑121 (MQ=255)

                                  acGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCa                                                                                                                                                  <  2:4855030/121‑1 (MQ=255)

                                    gCAGTTGCAGGTCGAGGTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTAGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGt                                                                                                                   >  2:2701277/1‑150 (MQ=255)

                                       gTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCg                                                                                                                >  2:5091778/1‑150 (MQ=255)

                                           cAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTg                                                                                                            >  2:1528069/1‑150 (MQ=255)

                                            aGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACAGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACCTCCACCTgg                                                                                                           >  1:4168879/1‑150 (MQ=255)

                                             ggTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGcc                                                                                                              <  2:965309/146‑1 (MQ=255)

                                              gTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGTCACAGCCCAGGGCAGTGTGATCGTCAAAGGTACCCGCTTTGACGCCCGCCTGGAc                                                                                                         >  1:1469312/1‑150 (MQ=255)

                                              gTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGAc                                                                                                         <  1:234802/150‑1 (MQ=255)

                                               tCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGAcc                                                                                                        >  2:1275613/1‑150 (MQ=255)

                                                 gAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACcca                                                                                                      <  1:3823150/150‑1 (MQ=255)

                                                  aGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACccag                                                                                                     >  1:3220247/1‑150 (MQ=255)

                                                    ttCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCCGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACccagcc                                                                                                   >  1:2892289/1‑150 (MQ=255)

                                                    ttCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACccagcc                                                                                                   >  1:166474/1‑150 (MQ=255)

                                                    ttCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACccagcc                                                                                                   <  2:456943/150‑1 (MQ=255)

                                                         cgcCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCAc                                                                                              >  2:306187/1‑150 (MQ=255)

                                                             ggCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCgt                                                                                          <  1:3700820/150‑1 (MQ=255)

                                                              gCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCgtg                                                                                         >  1:3264536/1‑150 (MQ=255)

                                                               ccAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCgtgt                                                                                        <  1:931430/150‑1 (MQ=255)

                                                               ccAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCgtgt                                                                                        >  1:4756235/1‑150 (MQ=255)

                                                                cAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAGCCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGtgtg                                                                                       <  2:2034738/150‑1 (MQ=255)

                                                                   cGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCg                                                                                    <  1:4221827/150‑1 (MQ=255)

                                                                    ggCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCgg                                                                                   <  1:3924838/150‑1 (MQ=255)

                                                                    ggCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCgg                                                                                   >  2:1142959/1‑150 (MQ=255)

                                                                      cACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTg                                                                                 <  2:698062/150‑1 (MQ=255)

                                                                            cgcCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAg                                                                           <  2:4811257/150‑1 (MQ=255)

                                                                             gcCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCCGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAgg                                                                          >  1:3398309/1‑150 (MQ=255)

                                                                                tGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGTCACTGCCCAGGGCAGTGTGTTGGTGACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGt                                                                       >  1:1875265/1‑150 (MQ=255)

                                                                                tGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGt                                                                       <  1:43638/150‑1 (MQ=255)

                                                                                tGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTGTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGt                                                                       <  1:3528410/150‑1 (MQ=255)

                                                                                     gCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGAcc                                                                                                        <  1:989241/112‑1 (MQ=255)

                                                                                     gCTGGTCAACTGATGATCAGCGTCGCCAATGACAGAAACCGGCCGTTTGTGGTCGACACTTCCCACGCCAGTGAGATAGAAGCATGAACCACCTAAGACCACCGCCTGGACCCAGCCAGCAACCGTGAGTCCGTTGAACAGGGGTCggag                                                                  >  2:4635958/1‑148 (MQ=255)

                                                                                        ggTGAAGTGCTGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGGGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCgg                                                               <  1:1116034/150‑1 (MQ=255)

                                                                                           gAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTTTGGTGGTCACTTCCCAGGGCAGTGTGTTGGTCACAGGTACCCGCGTTTACGTGCGGCTGGACCCAGCCAGCACCCGTGTGGCGGTGGTACAGGGGTCGGTGGGGGTg                                                            >  1:4125068/1‑150 (MQ=255)

                                                                                           gAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTg                                                            <  1:4846804/150‑1 (MQ=255)

                                                                                               tGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAgg                                                        <  2:517161/150‑1 (MQ=255)

                                                                                               tGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAgg                                                        >  2:3396720/1‑150 (MQ=255)

                                                                                               tGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAgg                                                        <  1:2254137/150‑1 (MQ=255)

                                                                                               tGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAgg                                                        >  2:446534/1‑150 (MQ=255)

                                                                                                gATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAggg                                                       <  1:4389550/150‑1 (MQ=255)

                                                                                                 aTGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCGTTGACGTCCGCCTGGACCCAGCCAGCACCCCTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGc                                                      >  1:4297848/1‑150 (MQ=255)

                                                                                                   gTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCaa                                                    <  2:3692514/150‑1 (MQ=255)

                                                                                                           tCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACt                                            >  2:54538/1‑150 (MQ=255)

                                                                                                              cccATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGc                                         <  1:2042402/150‑1 (MQ=255)

                                                                                                                cATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGACCAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCg                                       >  2:1286137/1‑150 (MQ=255)

                                                                                                                 aTGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCgg                                      >  2:2426265/1‑150 (MQ=255)

                                                                                                                   gACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAg                                                         >  2:4486849/1‑129 (MQ=255)

                                                                                                                      aGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCaa                                 <  2:4523857/150‑1 (MQ=255)

                                                                                                                            cGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTTACGTCCCCCTGGACCCAGCCAGCACCCCTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACg                           >  1:4276632/1‑150 (MQ=255)

                                                                                                                              gCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGc                         >  1:5332575/1‑150 (MQ=255)

                                                                                                                                cGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCg                       <  1:5408337/150‑1 (MQ=255)

                                                                                                                                     gtgGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAg                  <  2:888859/150‑1 (MQ=255)

                                                                                                                                       ggTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAggg                <  1:4553000/150‑1 (MQ=255)

                                                                                                                                       ggTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTGGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAggg                <  2:4538335/150‑1 (MQ=255)

                                                                                                                                        gatcacacTGCCCTGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAgggg               >  1:619047/5‑150 (MQ=255)

                                                                                                                                        gatcacacTGCCCTGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAgggg               >  1:2521032/5‑150 (MQ=255)

                                                                                                                                        gTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAgg                                                        <  2:5228585/109‑1 (MQ=255)

                                                                                                                                         tCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGt              <  1:2834543/150‑1 (MQ=255)

                                                                                                                                         tCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGt              <  2:4360321/150‑1 (MQ=255)

                                                                                                                                         tCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGt              >  1:4372737/1‑150 (MQ=255)

                                                                                                                                         tCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGt              >  1:4432874/1‑150 (MQ=255)

                                                                                                                                          tcacacTGCCCTGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTc             >  2:2899952/3‑150 (MQ=255)

                                                                                                                                           gACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCg            >  1:1462954/1‑150 (MQ=255)

                                                                                                                                           gACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCg            <  2:1208926/150‑1 (MQ=255)

                                                                                                                                           gACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCg            >  1:1558124/1‑150 (MQ=255)

                                                                                                                                            acacTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGc           <  1:2028739/150‑1 (MQ=255)

                                                                                                                                             cacTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGcc                        >  1:52008/1‑136 (MQ=255)

                                                                                                                                              acTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCat         >  1:1313833/1‑150 (MQ=255)

                                                                                                                                                tGCCCTGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCatat       >  2:3050172/1‑150 (MQ=255)

                                                                                                                                                tGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCatat       <  2:3410016/150‑1 (MQ=255)

                                                                                                                                                 gCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCAtata      <  1:1978825/150‑1 (MQ=255)

                                                                                                                                                 gCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCAtata      <  1:4795129/150‑1 (MQ=255)

                                                                                                                                                 gCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCAtata      <  1:2096207/150‑1 (MQ=255)

                                                                                                                                                    cAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGAt   <  2:4756235/150‑1 (MQ=255)

                                                                                                                                                    cAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGAt   >  2:2523905/1‑150 (MQ=255)

                                                                                                                                                    cAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGAt   <  1:4033609/150‑1 (MQ=255)

                                                                                                                                                     aGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGATg  <  2:3814904/150‑1 (MQ=255)

GCCGGATGGCTCGCATCTGGAGCTCAATGGCAACACGCAGTTGCAGGTCGAGTTCAGCGCCGGCCAGCGGCACGTGCGCCTGAACGCTGGTGAAGTGATGTTCAGCGTCGCCCATGACAGTAACCGGCCGTTTGTGGTCGACACTGCCCAGGGCAGTGTGATCGTCACAGGTACCCGCTTTGACGTCCGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGATG  >  NC_002947/1004380‑1004678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`