| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,037,825 | C→G | 5.3% | intergenic (+67/+49) | PP_0896 → / ← PP_0897 | carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,037,825 | 0 | C | G | 5.3% | 489.0 / 3.0 | 162 | intergenic (+67/+49) | PP_0896/PP_0897 | carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase |
| Reads supporting (aligned to +/- strand): ref base C (77/72); new base G (4/6); total (83/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 164 total aligned reads displayed.
GGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGT > NC_002947/1037677‑1037972 | gaggaAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACgt > 2:5041449/1‑150 (MQ=255) ggAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGt > 2:5046993‑M2/1‑149 (MQ=255) ggAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGt < 2:3542280‑M2/150‑2 (MQ=255) ggAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCGTCTGGCGTGCGCTGTACGTGt < 1:3545322‑M2/150‑2 (MQ=255) gAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtg < 2:1000491‑M2/150‑3 (MQ=255) gTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtggga > 2:1053538‑M2/1‑145 (MQ=255) cggcggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCGTCGGGCGTGCGCGGTACGTGggggagcg < 1:2348377‑M2/150‑9 (MQ=255) ggcggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTAc < 2:3785352/138‑1 (MQ=255) ggcggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgg < 2:1443313‑M2/150‑10 (MQ=255) ggcggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgg > 2:5098477‑M2/1‑141 (MQ=255) atcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCggg > 2:1978130‑M1/86‑150 (MQ=255) atcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCggg > 1:4852988‑M1/86‑150 (MQ=255) accctggccccgccctgtggcagagcaagattgccgaacgcccggccctcgaagtcaagtaacctgacgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGCAGCCATCTCGCTTGCGCTGGACGTGGGGGAGCGGGc > 2:715685‑M1/85‑150 (MQ=255) tGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgc > 2:3051993‑M2/1‑135 (MQ=255) tGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgc > 2:3051910‑M2/1‑135 (MQ=255) gCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgc < 2:2010767‑M2/150‑20 (MQ=255) gCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCGTGCGCTGTGCGTGtgggagcgggcgtgccccc < 1:4777456‑M2/150‑20 (MQ=255) gCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGAAGCCTTCTGGCATGCGCAGTACGTGtgggagcgggcttgcccgc < 2:3189459‑M2/150‑20 (MQ=255) gggAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGGAATCCCCCTCCCAAAAACGTAGCCGTCTGGCTTGCGCAGTAAGTGtgggagcgggcgttgccccga < 1:1068933‑M2/150‑22 (MQ=255) ggAAGGGCTGGTGTTTACGTGGCGGGACTGGCCGGAGCAGTTCGAGTGAGTCCTGTGATGACTTTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaa > 1:5345475‑M2/1‑128 (MQ=255) gccctgtggcagagcaagattgccgaacgcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGGGGGAGCGGGCTTGCCCGCGaa > 2:2736028‑M1/74‑150 (MQ=255) cgggCTGGTGTTTACCTGGGGGGACTGGCCGGAGCTTTTCGAGTGTGTCCTGTTATGAGTGGGGCGGCCTCTTCGCGGGCAAGCCCGCTCCAAAATGCGTAGCGTTGTGGCTTGCGCTTTAGGTGTGGGAGCGGGGTTGCCCGCGAagca < 2:959681/149‑1 (MQ=255) cAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTTCCCGCGAAGCAgccg > 1:2190212/1‑150 (MQ=255) gtgtTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgg > 2:5130445‑M2/1‑118 (MQ=255) gtgtTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgg < 1:5130445‑M2/121‑4 (MQ=255) gtgtTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGccgccg > 2:866533/1‑150 (MQ=255) aCCTGGCGGGACTGGCCGGAGCAGTTCGCGAGCGTCCTGTGATGACTGGGGCGGCCTCTTCGCGGGCACGCCCGCTCCCAAATGCGTAGCCTACGGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTa < 2:4777456/150‑1 (MQ=255) aCCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTa > 2:1741339/1‑150 (MQ=255) cTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCCGTTACa > 1:3974320/1‑150 (MQ=255) cTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCGTGCGCTGTACGTGTGGGAGCGGGCGTGCCCGCGAAGCAGCCGCCGCACTTACa > 1:3974264/1‑150 (MQ=255) cTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCACCCAAAAGCGTAGCCGTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAACCAGCCGCCGCAGTTACa > 1:3597427/1‑150 (MQ=255) ggCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATc < 2:3545405/150‑1 (MQ=255) ggACTGGCCGGAGCATTTCGAGAGAGTCCTTTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCAAAATGCGTAGCCTTCTGGATTGCGCTGTACGTGTGGGCGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGt < 2:1104603/150‑1 (MQ=255) ggAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttcact < 2:1134007/150‑1 (MQ=255) ggAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCCCTCCCAAAATGGTAGCCATCTGGCGTGCGGGGTTAGTGTGGGGGCGGGCTTGGCCCCGAAGCAGCCGCCCCAGGTTCCACAGGTTaattgact > 1:3780941/1‑150 (MQ=255) gAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTCCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGAACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacgtcactt < 2:5444705/150‑1 (MQ=255) aGCAGTTCGAGACAGTCCTGTGATGACGGTGGCGGCCTCTTCGCGGGAACGCCCGCTCCCAAAGGCTTAGCCTTCTGGATTGCGGTGTCCGTGTGGGCGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttcacttc < 1:4477508/150‑1 (MQ=255) gagagaGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGCGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGAAGGccg > 2:425666/1‑149 (MQ=255) gagagaGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCGTGCGCTGTACGTGTGGGAGCGGGCGTGCCCGCGAAGCAGCCGCCGCAGTTCCCTCAGGTTACTTCACTTCGACGGccc > 2:4398785/1‑149 (MQ=255) agcgtgTCCTGTGTGGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAATTGCGTAGCCTTCTGGATTGCGCTGTAGGTGTGGTAGCGGGGTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAg < 2:253757/145‑1 (MQ=255) agagagTCCTGTGATGACTGGGGCGGCCTCTTCGCGGGCAACCCCGCTCCCAAATGCTTCGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAg < 1:2676598/150‑1 (MQ=255) gagagTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAATCCCCCTCCCAAAAGCGTAGCCTTCTGGCTGGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCCCAGTTACATCAGGTTACATCACATCGACGGCCAgg > 1:434171/1‑150 (MQ=255) gtgCTGACGGGGGCGGCCTCTTCGGGGGCACGCCCGCTCCCAATTGCGTCGCCTTCGGGCTTGCGCTGTCCGTGTGGGAGCGGGCTGGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCa < 1:4926143/150‑1 (MQ=255) tgatgaCTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCaa > 2:1756724/1‑150 (MQ=255) atgaCTGGGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCTTAGCCTTCGGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATc < 2:610623/150‑1 (MQ=255) cTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCGTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGc > 2:2182047/1‑150 (MQ=255) tgGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGctct < 2:1323484/150‑1 (MQ=255) tgGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGctct < 1:4975275/150‑1 (MQ=255) tgGCGGCCTCTTCGCGGGCAAGCCCCCGCCCAAATGCGTAGCCGTCGGGCTTGCGCTGTACGTGTGGGAGCGGGCGTGCCCCCCAAGCAGCCCCCGCAGTTACATCAGGTTACTTAACATCGACGGCCAGGCGTTCGGCAAAATTGctct > 1:3124244/1‑150 (MQ=255) gcggcCTCTGGGGGGGCAAGCCCGCCCCAAATTGGGTCGCATTCGGGCTTGGGCTGTAGGTGTGGGTGGGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGc < 1:3426555/150‑1 (MQ=255) ctctTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCGTCTGGCTTGCGCGGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcag > 1:4018086/1‑150 (MQ=255) ctctTCGCGGGCAAGCCCGCTCCAAAATGCGTAGCCTCGGGGGTTGCGCTGAACGTGGGGGCGGGGGCTGGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcag < 1:1890056/150‑1 (MQ=255) tctTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTCCGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagg < 1:4545818/150‑1 (MQ=255) CTTCGCGGGCAAGCCCGCGCCCAACTGCGTCGCCTTCTGGCTTGCGCGGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcaggg > 2:2535569‑M1/1‑150 (MQ=255) ggaGCGGGCTTGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagggc < 1:824091‑M1/147‑1 (MQ=255) GCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagggcagg < 1:3727964‑M1/150‑1 (MQ=255) GCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagggcagg > 1:1256588‑M1/1‑150 (MQ=255) cacgcccgcccCAAAATGCGTCGCCTCCGGGCTGGCGCTGCCGGGGGGGGCGCGGGCTGGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAg < 1:579279/147‑1 (MQ=255) acGCCCGCCCCCACATGCGTCGCCTTCTGGCTGGCGCTGTCGGGGTGGGCGGGGGCTGGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGt > 1:1070052‑M1/3‑150 (MQ=255) aaGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagcagccgccgcagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacc < 1:3709410‑M2/150‑106 (MQ=255) aaGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacc < 1:4793221‑M2/150‑106 (MQ=255) AAGCCCGCTCCCAACTGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGt > 2:2817048‑M1/1‑150 (MQ=255) AAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGt < 2:497312‑M1/150‑1 (MQ=255) gCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccg < 2:713679‑M2/150‑108 (MQ=255) GCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGa < 2:2242497‑M1/150‑1 (MQ=255) GCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGa < 2:5103025‑M1/150‑1 (MQ=255) ccggCTCACAATTGCGTTGCCTTGTGGGTTGGGCTGTAGGTGTGGGTGCGGGCTTGCCCGCGAAGCAGCTGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGAt < 1:5225522/147‑1 (MQ=255) cccGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgc < 1:3823200‑M2/150‑109 (MQ=255) CCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTCCGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGAt > 2:3487653‑M1/1‑150 (MQ=255) CCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGAt < 2:500164‑M1/150‑1 (MQ=255) CCCGCTCCAATTTGGGTCGCCTTGGGGCTGGCGCTGTCGGTGTGGGTGGGGGCTTCCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGAt > 1:1073813‑M1/1‑150 (MQ=255) ccGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgcc < 1:2710512‑M2/150‑110 (MQ=255) ccGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggacactctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgcc < 1:2710481‑M2/150‑110 (MQ=255) CCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTAATTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGAtg < 2:774275‑M1/150‑1 (MQ=255) cGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagcagccgccgcagttacatcaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgccg < 2:1793174‑M2/150‑111 (MQ=255) cGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagcagccgccgcagttacatcaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgccg < 2:4534692‑M2/150‑111 (MQ=255) cGCTCCCAAATGCGTAGCCTTCTAGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgccg < 1:655983‑M2/150‑111 (MQ=255) CTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagggca > 2:4742151‑M1/1‑135 (MQ=255) CTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagggca < 1:4742151‑M1/135‑1 (MQ=255) TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTa < 1:4431595‑M1/150‑1 (MQ=255) TCCAAATTGCGTCGCCTTCTGGTTTGGGCTTTCGGTGGGGGCGGGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTa > 1:899966‑M1/1‑150 (MQ=255) aattGCGTAGCCTGCTTGCTGGCGCTGTACGTGTGGGAGGGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGa < 2:5141326/147‑1 (MQ=255) aaaTGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgccgcacttcc < 2:842872‑M2/150‑118 (MQ=255) attGCGTAGCCTTCTGGCTTGCGCTGTCCGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGAt < 1:1794999/148‑1 (MQ=255) aaTGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGAt > 1:5385860/1‑150 (MQ=255) aaTCCGTAGCCTGCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTGCACTTCGACGGCCAGGCTTTCGGCCATCGTGCGCTGCCACAGGGCAGGGCCAGTGATGTGTACCGAt > 2:4513816/1‑150 (MQ=255) gTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCAcc > 2:5424853/1‑150 (MQ=255) aGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgccgcacttcctccaaatc < 2:3857836‑M2/150‑126 (MQ=255) gCCTTCTGGCTTGCGCGGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGtt < 2:4096444/150‑1 (MQ=255) ccTTGTGGCTGGCGGTGCAGGTGTGGGCGCGGCCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTg < 1:1000491/150‑1 (MQ=255) ttCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCt > 2:5238666/1‑150 (MQ=255) ttCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCt > 1:2576502/1‑150 (MQ=255) cTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGt > 2:4265006/1‑150 (MQ=255) ggCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTcc > 2:3968901/1‑150 (MQ=255) ttGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACg > 1:3663745/1‑150 (MQ=255) gcTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgccgcacttcctccaaatctacctcacacaccag < 2:3207787‑M2/150‑141 (MQ=255) gcTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGa > 1:5113514/1‑150 (MQ=255) gcTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGa > 2:3153926/1‑150 (MQ=255) tGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACg > 2:1766159/1‑150 (MQ=255) tGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACg > 2:2906289/1‑150 (MQ=255) | GGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGT > NC_002947/1037677‑1037972 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |