| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,101,805 | A→C | 6.8% | A127A (GCA→GCC) ‡ | mlaD → | phospholipid ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,101,805 | 0 | A | C | 6.8% | 641.6 / 25.0 | 192 | A127A (GCA→GCC) ‡ | mlaD | phospholipid ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (84/95); new base C (4/9); total (88/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 195 total aligned reads displayed.
TACACCGGTCGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGCCTGCTGGTGCT > NC_002947/1101656‑1101954 | tACACCGGTCGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCa > 2:1883309/1‑150 (MQ=255) acacCGGTCGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGaaa > 1:1651018/1‑150 (MQ=255) acCGGTCGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAAcc > 1:4485218/1‑150 (MQ=255) ggTCGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAAccatc < 1:1003261/150‑1 (MQ=255) gTCGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAAccatcc > 2:4460126/1‑150 (MQ=255) cGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTTGCAccatcctt < 2:5297435/150‑3 (MQ=255) ggTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCATGGATGGTTGCACCATCCTTGa < 2:869024/150‑1 (MQ=255) ggTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGa < 2:1781700/150‑1 (MQ=255) aCGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGacaca < 2:3934976/150‑1 (MQ=255) gCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTc > 2:4282607/1‑150 (MQ=255) cAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCg < 1:5218729/150‑1 (MQ=255) aGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAAccatccat > 1:1950325/1‑137 (MQ=255) gCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACCGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGc > 2:1346094/1‑150 (MQ=255) tGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCAc < 1:1786508/150‑1 (MQ=255) gACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTg < 1:3548114/150‑1 (MQ=255) gACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTg < 2:2848336/150‑1 (MQ=255) cAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGt < 2:1990719/150‑1 (MQ=255) aaGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCgg > 2:4066824/1‑142 (MQ=255) aaGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTg > 1:1019325/1‑150 (MQ=255) cggtcgATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGCTGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTgg < 1:4002289/150‑1 (MQ=255) ggtcgATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTgga > 1:639534/1‑150 (MQ=255) gtcgATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTggag > 2:538756/1‑150 (MQ=255) tcgATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTggagg < 2:438010/150‑1 (MQ=255) tAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCt > 1:4111387/1‑150 (MQ=255) ccTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGAt > 1:4217993/1‑150 (MQ=255) ttatcgaccgacTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGAtt < 1:4513784/146‑1 (MQ=255) cgacTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCt > 2:3173010/1‑138 (MQ=255) cgacTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCt < 1:3173010/138‑1 (MQ=255) gacTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTc > 1:1109180/1‑150 (MQ=255) acTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTcc > 2:360576/1‑150 (MQ=255) tCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTg < 1:4721275/150‑1 (MQ=255) ccACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGc < 2:1217081/150‑1 (MQ=255) cACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCttgc < 1:4570053/150‑4 (MQ=255) cACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCt > 2:4751957/1‑150 (MQ=255) cACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCAACAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCt < 2:2073401/150‑1 (MQ=255) tGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAAccatc > 2:3554075/1‑94 (MQ=255) tGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCaa > 2:1255511/1‑150 (MQ=255) tGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCaa > 2:1185662/1‑150 (MQ=255) tGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCaa < 2:3301667/150‑1 (MQ=255) ccTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAAct < 1:4852286/150‑1 (MQ=255) ccTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAAct > 1:2488372/1‑150 (MQ=255) tCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAAccatcc > 2:1664593/1‑91 (MQ=255) cGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTg > 1:216550/1‑150 (MQ=255) gATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGt > 1:3672807/1‑150 (MQ=255) aTCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGtt < 2:618162/150‑1 (MQ=255) tGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCa > 1:846826/1‑150 (MQ=255) tGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCa > 1:205520/1‑150 (MQ=255) gACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCaa < 1:5438379/150‑1 (MQ=255) gACCGCCGGTTGGCTGGGTGAGAAGTAGATGGGCATCTGCGTTGGCGGTGTAGACGATGTGCTCAAGGATGGTGCAACCATCCATGACACAGAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCACCTCTGTTGGcta < 2:4197568/150‑3 (MQ=255) cgccgGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGA‑‑TGATTGGCAAGTTCCTg > 2:3363802/1‑128 (MQ=255) cgccgGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGA‑‑TGATTGGCAAGTTCCTg < 1:3363802/128‑1 (MQ=255) ccgGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAAc > 2:3716318/1‑150 (MQ=255) cgGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAAcc > 1:5342908/1‑73 (MQ=255) gTTTGCTTGGTGAGAAGAACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGa > 2:1644694/1‑150 (MQ=255) tttGCTTGGTGAGAAGTACATCTGCATCATCGTTGGCGTTGAAGACGAAGTGCTCAAGGATTGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGaa < 2:5104410/150‑1 (MQ=255) tttGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGaa < 1:3851268/150‑1 (MQ=255) tttGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGaa < 2:1685325/150‑1 (MQ=255) ttGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTc > 2:1057922/1‑120 (MQ=255) ttGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTc < 1:1057922/120‑1 (MQ=255) ttGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGaaa < 2:3651425/150‑1 (MQ=255) tGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAaag < 1:4015415/150‑1 (MQ=255) gCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCa > 1:5007984/1‑125 (MQ=255) gCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAaaga > 2:273389/1‑150 (MQ=255) cTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAaagaa < 1:2644243/150‑1 (MQ=255) ttGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGa < 1:2839903/105‑1 (MQ=255) ttGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAaagaag > 1:279224/1‑150 (MQ=255) tGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAgc < 2:1896549/150‑1 (MQ=255) tGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAgc < 2:2548351/150‑1 (MQ=255) aGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCgg < 2:3475816/150‑1 (MQ=255) tACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCt < 2:2363258/150‑1 (MQ=255) cGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTa > 1:929074/1‑150 (MQ=255) cGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTa > 1:1163115/1‑150 (MQ=255) gCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCt > 2:2955265/1‑100 (MQ=255) gCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCt < 1:2955265/100‑1 (MQ=255) cATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAgg > 1:4529709/1‑150 (MQ=255) aTCAGCGTTGGCGGTGAAGACGAAGTGCTGAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGa < 1:2798280/150‑1 (MQ=255) aTCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCTAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGa < 2:4836062/150‑1 (MQ=255) aTCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGa > 1:4436368/1‑150 (MQ=255) tCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAg > 1:1235261/1‑150 (MQ=255) gCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTAc < 2:3520504/150‑1 (MQ=255) gCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTAc < 2:929074/150‑1 (MQ=255) cGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTAcc > 1:1721208/1‑150 (MQ=255) cGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGAt < 2:1527144/150‑1 (MQ=255) ggTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGAtt > 2:3775275/1‑150 (MQ=255) gTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGAttt < 2:455044/150‑1 (MQ=255) cGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCt < 1:2581482/150‑1 (MQ=255) gAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTCCCCATGATTTCGATCCTg > 2:4993469/1‑150 (MQ=255) gAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGAt < 2:4224679/146‑1 (MQ=255) gAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGAt > 1:4224679/1‑146 (MQ=255) tCATGGATGGTTGCACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTg > 2:2683928/1‑150 (MQ=255) tCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTg > 1:2705987/1‑150 (MQ=255) cAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTgg > 1:3876166/1‑150 (MQ=255) aaGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGc > 1:1808736/1‑150 (MQ=255) aaGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGc > 1:4164212/1‑150 (MQ=255) ggATGGTTGCACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGCct > 1:3794353/1‑150 (MQ=255) ggATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGACCCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGCct > 2:1317305/1‑150 (MQ=255) gATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGCctg > 2:1010242/1‑150 (MQ=255) tGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGCctgct < 2:3870631/150‑1 (MQ=255) gTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGCCTGCTgg < 2:4584119/150‑1 (MQ=255) tGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGCCTGCTGGt < 2:4436368/150‑1 (MQ=255) | TACACCGGTCGGGTGACGTTGCAGCTGGACAAGTCGGTCGATAACCTGCCGACCGACTCCACTGCCTCGATCCTGACCGCCGGTTTGCTTGGTGAGAAGTACATCGGCATCAGCGTTGGCGGTGAAGACGAAGTGCTCAAGGATGGTGCAACCATCCATGACACACAGTCGGCACTGGTGCTGGAGGATCTGATTGGCAAGTTCCTGCTCAACTCTGTTGGCAAGGAACCGAAAGAAGCGCAACCGGCTAATTAAGGAGTACCCATGATTTCGATCCTGCGACGTGGCCTGCTGGTGCT > NC_002947/1101656‑1101954 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |