| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,198,338 | C→T | 5.2% | A214A (GCC→GCT) | gspE → | protein secretion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,198,338 | 0 | C | T | 5.2% | 552.3 / 12.3 | 174 | A214A (GCC→GCT) | gspE | protein secretion protein |
| Reads supporting (aligned to +/- strand): ref base C (76/89); new base T (6/3); total (82/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.61e-01 | |||||||||||
Only 100 of 183 total aligned reads displayed.
ATGGCCCGCCTGGACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTGAACAGCCT > NC_002947/1198189‑1198487 | aTGGCCCGCCTGGACATTGCGGAAAAGCGACAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGcc > 1:2908867/1‑150 (MQ=255) ggCCCGCCTGGACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCGTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTAACCACCAAGCCCCGCATACACCGCCAGCGGGTGGTGAATCGCCTGCTCGACAACAAGGCCAg > 2:2331045/1‑150 (MQ=255) gCCCGCCTGGACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGc < 1:3902075/150‑1 (MQ=255) ccGCCTGGACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCct > 1:3599175/1‑150 (MQ=255) ccGCCTGGACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCct > 1:5144996/1‑150 (MQ=255) cGCCTGGACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCctg < 1:3784259/150‑1 (MQ=255) ccTGGACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCctgct < 2:194575/150‑1 (MQ=255) cTGGACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCctgctg < 1:1154063/150‑1 (MQ=255) cTGGACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCctgctg < 1:2116180/150‑1 (MQ=255) tGGACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCTGGCctgcttg < 2:3827274/150‑3 (MQ=255) tGGACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCTGGCctgcttg < 1:4093416/150‑3 (MQ=255) ggACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTAgc < 2:3069749/150‑1 (MQ=255) gACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGgcg < 2:4785150/150‑1 (MQ=255) gACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGgcg > 1:1017882/1‑150 (MQ=255) aCATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCGTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCATGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGgcgc < 2:4005251/150‑1 (MQ=255) cATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCt < 1:3812672/150‑1 (MQ=255) aTTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCAGGCTGgcctgc < 1:2900638/150‑5 (MQ=255) ttGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCct > 2:4584277/1‑139 (MQ=255) tGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGGCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGa > 1:5325293/1‑150 (MQ=255) tGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGa < 1:2011866/150‑1 (MQ=255) tGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGa > 1:5325615/1‑150 (MQ=255) ggAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATaa > 1:1046255/1‑150 (MQ=255) caaGCGGCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGCGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCt < 2:320965/149‑1 (MQ=255) aaGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTg < 2:2794158/150‑1 (MQ=255) aGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTgg < 1:4902289/150‑1 (MQ=255) aGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTgg < 2:4860464/150‑1 (MQ=255) tCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCAt > 2:1793636/1‑150 (MQ=255) gCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGcc > 2:4510574/1‑150 (MQ=255) ccccAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGGGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCg > 1:2461948/1‑150 (MQ=255) cccAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCgg > 1:1918050/1‑150 (MQ=255) cccAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCgg > 1:4457092/1‑150 (MQ=255) ccAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGc > 2:4386540/1‑150 (MQ=255) ggACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGc < 1:541907/150‑1 (MQ=255) ggACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGc < 2:4220194/150‑1 (MQ=255) ggACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGc < 1:3241949/150‑1 (MQ=255) gACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCg < 1:4188219/150‑1 (MQ=255) cATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCa > 2:3018955/1‑150 (MQ=255) aTCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCTCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTTCAg < 2:3865512/150‑1 (MQ=255) aTCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAg > 2:3977324/1‑150 (MQ=255) tCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAgg < 1:2012749/150‑1 (MQ=255) ttGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTg > 1:3455426/1‑150 (MQ=255) ttGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTg > 1:2363084/1‑150 (MQ=255) tGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTgc < 1:995378/150‑1 (MQ=255) gcgcgGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCa < 1:4005004/150‑1 (MQ=255) gcggGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTCTTGCAGGGCCTGCGCAGTTGc > 1:998732/1‑150 (MQ=255) gggCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTg < 2:359794/150‑1 (MQ=255) gcgAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGgcgc > 2:3499479/1‑150 (MQ=255) gcgAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGgcgc > 1:1783426/1‑150 (MQ=255) aCGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACg < 2:1168908/150‑1 (MQ=255) gTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGc < 1:4646345/150‑1 (MQ=255) aCGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCAt < 1:614922/150‑1 (MQ=255) cGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCAtt < 1:716566/150‑1 (MQ=255) cGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCAtt < 1:3018955/150‑1 (MQ=255) gTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATtgtg < 1:288286/150‑1 (MQ=255) gTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATtgtg < 2:1716839/150‑1 (MQ=255) gTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATtgtg < 1:1195314/150‑1 (MQ=255) ctcGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCt < 2:4297725/150‑1 (MQ=255) ctcGACCGTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTAGTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCt < 2:18381/150‑1 (MQ=255) tcGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTg > 1:4335919/1‑150 (MQ=255) cTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCAc > 1:5130320/1‑150 (MQ=255) cTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCAc < 1:1571459/150‑1 (MQ=255) cTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCAc > 1:1445111/1‑150 (MQ=255) tGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCg < 2:1472930/150‑1 (MQ=255) cccGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCggg < 1:2974844/150‑1 (MQ=255) cGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGcc > 1:1548304/1‑150 (MQ=255) cATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGAc < 1:2822286/150‑1 (MQ=255) cATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGAc < 1:5017183/150‑1 (MQ=255) ccACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCgg > 2:574569/1‑150 (MQ=255) gAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGc < 2:2908867/150‑1 (MQ=255) gAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGc < 2:4089/150‑1 (MQ=255) gCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCaa < 1:2981389/150‑1 (MQ=255) gCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCaa < 1:2253557/150‑1 (MQ=255) gtggtgATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGAcc > 2:4163085/1‑150 (MQ=255) gtgATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACg > 2:4684753/1‑150 (MQ=255) gATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGAc > 1:1874056/1‑150 (MQ=255) gcgcGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCtt > 1:2716755/1‑150 (MQ=255) cgcgTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTg < 1:4555896/150‑1 (MQ=255) cgTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTa < 2:1610206/150‑1 (MQ=255) tCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCa > 1:3922676/1‑150 (MQ=255) gACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGc > 2:3785034/1‑150 (MQ=255) gccaGCAGGCTGGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGcc > 2:2596645/4‑150 (MQ=255) gccaGCAGGCTGGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAACGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGcc > 2:617733/4‑150 (MQ=255) ccaGCAGGCTGGCCTGCTTGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCt > 1:3144509/3‑150 (MQ=255) cAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCt < 1:2598901/150‑1 (MQ=255) caGCAGGCTGGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTg > 2:3148813/2‑150 (MQ=255) caGCAGGCTGGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTg > 1:5018012/2‑150 (MQ=255) caGCAGGCTGGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTg > 1:340978/2‑150 (MQ=255) aGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTGa < 2:5421502/150‑1 (MQ=255) aGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTGa > 1:2752285/1‑150 (MQ=255) gCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGTGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTGaa > 2:5029477/1‑150 (MQ=255) gCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCa > 1:2505540/1‑143 (MQ=255) gCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCa < 2:2505540/143‑1 (MQ=255) gCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTGaa > 1:3700390/1‑150 (MQ=255) gCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTGaa < 2:2064663/150‑1 (MQ=255) gCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTGaa > 1:2807174/1‑150 (MQ=255) gCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTGaa > 1:5313445/1‑150 (MQ=255) gCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTGAACAGc > 2:412185/1‑150 (MQ=255) gCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTGAACAGc > 1:561678/1‑150 (MQ=255) cAGCCTGCTGGCGCTGGATACCCTGGGCATGCCGGCAGCGGTATTGCGGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTGAACAGCCt < 2:2205933/150‑1 (MQ=255) cAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTGAACAGCCt > 1:1655585/1‑150 (MQ=255) | ATGGCCCGCCTGGACATTGCGGAAAAGCGTCAGCCCCAGGACGGCCGCATCACCTTGCGCGCGGCGGGGCGCGAAGTGGACGTACGAGTCTCGACCTTGCCCGGCATCCACGGCGAGCGGGTGGTGATGCGCGTGCTCGACAAGCAGGCCAGCCTGCTGGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTGAACAGCCT > NC_002947/1198189‑1198487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |