| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,210,835 | T→A | 7.3% | intergenic (+19/+18) | ytnA → / ← PP_1060 | amino acid permease YtnA/glutamate synthase large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,210,835 | 0 | T | A | 7.3% | 382.0 / 14.6 | 122 | intergenic (+19/+18) | ytnA/PP_1060 | amino acid permease YtnA/glutamate synthase large subunit |
| Reads supporting (aligned to +/- strand): ref base T (44/68); new base A (3/6); total (48/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 125 total aligned reads displayed.
TGGCGTACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAA > NC_002947/1210686‑1210984 | gCGTACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGc < 2:241611/150‑1 (MQ=255) gCGTACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGc < 1:651817/150‑1 (MQ=255) gCGTACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGc < 1:225585/150‑1 (MQ=255) cGTACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCg < 1:331093/150‑1 (MQ=255) gTACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCgg > 2:5256431/1‑150 (MQ=255) gTACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCgg > 2:5256489/1‑150 (MQ=255) tACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGc < 2:1626731/150‑1 (MQ=255) tACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGc < 2:1604537/150‑1 (MQ=255) aCTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGcc < 1:3056052/150‑1 (MQ=255) cTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCAAAGCGGccc < 1:4730618/150‑1 (MQ=255) cTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCAAAGCGGccc < 1:568359/150‑1 (MQ=255) ttCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGGGCGGTGGGGcccc > 1:1901380/1‑150 (MQ=255) ttCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCGGGGCGGcccc > 2:692834/1‑150 (MQ=255) ttCGAGGATACACGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGTGGGGGCCGGTTTGTCGccc > 1:5096727/1‑150 (MQ=255) tCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCAAAGCGGCCCCa < 1:555517/150‑1 (MQ=255) tCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCAAAGCGGCCCCa < 2:2881554/150‑1 (MQ=255) tCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCAAAGCGGCCCCa < 1:1411560/150‑1 (MQ=255) cGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCGTTGCGGCCCCAg > 2:1789048/1‑150 (MQ=255) cGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCAAAGCGGCCCCac < 1:2355646/150‑2 (MQ=255) gAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCGTTTCGGccccccc > 2:2344750/1‑147 (MQ=255) gAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGc < 2:1085382/150‑1 (MQ=255) gAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCGTTGCGGCCCCAGc > 2:1207818/1‑150 (MQ=255) aGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACCTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCg < 2:4799390/150‑1 (MQ=255) gATACGGGTGTGGCCCTGTACATGGGCCCGGCTTTCCTGGTGTTGCTGACTGTGCTGTATTACACGTTCCGCCTGGCGCCTAAAGACGCACATGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCacgtca < 1:4711465/150‑6 (MQ=255) gcgTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCGGTGGGGCCCCCGCGTggtctc > 2:3408213/1‑150 (MQ=255) cgTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCa < 1:2957353/150‑1 (MQ=255) cgTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCa < 1:2858697/150‑1 (MQ=255) cgTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCCGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCa < 1:1886480/150‑1 (MQ=255) ccTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCCCGTTTCGGCCCCACCGTACTATCAGGCCCCCa > 2:4087062/1‑150 (MQ=255) cTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCGGTGGGGCCCCCCCCGTATCGCAGGCCCCCAc > 2:643943/1‑150 (MQ=255) cATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCGTTGCGGCCCCCCCCTTCTCTCAGGCCGCCCCATCGc > 1:3627134/1‑150 (MQ=255) cATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCCCGTTGCGGCCCCACCCGTCTCGCAGGCCCCCCCATCGc > 1:3627433/1‑150 (MQ=255) cATCGGCCCGGCGTTCCTGGGGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGc < 2:767989/150‑1 (MQ=255) ggCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCtgtg < 2:1977919/150‑1 (MQ=255) gCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGc < 1:1044855/150‑1 (MQ=255) gCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCCCGTTTCGGCCCCACCCTTCACAAAGGCCCCCCCATCGCTGTGc > 1:5388254/1‑150 (MQ=255) cGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCCCGTTGCGGCCCCACCCGTGTCACAGGCCCCCACAGAGCTGTTCGGc > 2:2450907/1‑150 (MQ=255) cGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGGTCTCTAAGGCCCCCACATAGCGGTGCGGc > 2:425162/1‑150 (MQ=255) ggCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCt < 1:4001948/150‑1 (MQ=255) tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGaaa < 1:643943/150‑1 (MQ=255) tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGaaa < 2:3192415/150‑1 (MQ=255) tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGaaa < 1:2950977/150‑1 (MQ=255) tCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGaaa < 1:3575040/150‑1 (MQ=255) gtgtTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑c < 2:4754297/150‑1 (MQ=255) tgtTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑cc < 1:1447957/150‑1 (MQ=255) tGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑cc < 1:1898244/150‑1 (MQ=255) cTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCGTTTCGGCCCCACCCGTCTCTCAGGCCGCCACATAGCTGTTCGGCTCGAAACTGT‑CCG‑CCCg > 2:3599438/1‑150 (MQ=255) tGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCgg < 2:2026091/150‑1 (MQ=255) gACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCGTTGGGGCCCCCCCGGTGTCGGAGGGCCCCCCCTCGCTGGGGGGGTCGGAACAGT‑ACG‑CCCcgg > 2:1613493/1‑150 (MQ=255) gCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGtt < 1:3231546/150‑1 (MQ=255) tGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCGTTTCGGCCCCACCGTTGTCTCAGGCCCCCACTTAGCTGTGCGGCGCGAAACAGT‑ACG‑CCCGGGCCAGATGc > 2:1332617/1‑150 (MQ=255) gTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGcc < 1:5256489/150‑1 (MQ=255) ttACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGCGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCcaca > 2:4943704/1‑150 (MQ=255) cGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCcgc < 1:1674464/150‑1 (MQ=255) gTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCGTTGCGGCCCCACCGGTCGCTCAGGCCGCCACATAGCTGTGGGGGGCGAAAAAGT‑CCG‑CCCCGGCCAGGTGCcccaaacgcc > 2:2164957/1‑144 (MQ=255) tCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGaa < 2:1578049/150‑1 (MQ=255) tCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGaa < 1:4087062/150‑1 (MQ=255) cGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATa < 1:5015871/150‑1 (MQ=255) ccTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGa < 1:1509334/150‑1 (MQ=255) cTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCGTTTGGGCCCCACCGGTATCTGAGGCCGCCCCGTCGCGGTGCGGCGCGGAACAGT‑CCGCCCCGGCCCGGTTGCC‑CATACGCGCAGAGaa > 2:5150113/1‑150 (MQ=255) gAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCGGTGCGGCCCCCCCCGTGTCTCAGGCCCCCACATCGCGGTGCGGCGCGAAACTGT‑CCG‑CCCCGGCCCCGTGCCACCACCCCGACTAGAACAGGcccg > 2:3960187/1‑148 (MQ=255) gCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGGCGCGTTTCGGCCCCACCCGTGTCGCACGCCGCCCCCTCCCCGTGCGGCGCCAAAAAGTCCCG‑CCCGGCCCCG‑TGGCACAGCCCCGCAAAGAAAAGGGCGTTGAccgc > 2:4003960/1‑148 (MQ=255) gCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTc < 2:122665/150‑1 (MQ=255) gCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTc < 1:1918652/150‑1 (MQ=255) caAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGcc < 1:3944851/150‑1 (MQ=255) caAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGcc < 1:3944897/150‑1 (MQ=255) aaGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCg < 2:504302/150‑1 (MQ=255) gtgtGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTc < 2:835592/150‑1 (MQ=255) tgtgACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTca < 2:4654813/150‑1 (MQ=255) gtgACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCGGTGCGGCCCCCCCGGTCTCGCAGGCCGCCACATCGCGGTGCGGCGCGAAACAGT‑CCG‑CCCGGGCCAGGGTCCCCAACCCCGAATATTAAAGGCCGTTCACCGCGCCCGTgag > 2:1742564/1‑150 (MQ=255) cAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCt < 1:2187029/150‑1 (MQ=255) aGCCTCCTGACCTGACGT‑GGGGGCGCGTTGGGGGCCCAGCCGTGTCGGAGGCCCCCCCTACCCTGTGGGGCGCGGCACAGT‑CCG‑CCCCGGCCCGGTGGCCCAACCGCCAAAAGAAAATGCCGGTCAACACGCCCGGCAgcaccgcaccgg > 2:4694803/1‑148 (MQ=255) tcctGACCTGACGT‑GGGGCCGCGTTGCGGCCCCACCCTTCTCGCCGGCCCCCCCATCGCGGTGCGGCGGGAAACTGG‑CCG‑CCCGGGCCACGTGCCCCAACCCCGGAAAGAAAGGGCCGTGCACCGCGCCCGGCCGCAGGTCACCGGGcgt > 2:4993793/1‑148 (MQ=255) acctgacGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGa < 2:3042331/150‑1 (MQ=255) acctgacGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGa < 1:2344750/150‑1 (MQ=255) acctgacGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGa < 2:3042115/150‑1 (MQ=255) cctgacGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCATATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGaa < 2:3654589/150‑1 (MQ=255) agaacgct‑GGGGCCGCAAAGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGaa > 2:3764693/8‑150 (MQ=255) acGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACTTCCGCTAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAAcaca < 2:5096727/150‑1 (MQ=255) acGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAAcaca < 1:209294/150‑1 (MQ=255) cGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACAt < 1:692834/150‑1 (MQ=255) gT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATg > 1:3505753/1‑150 (MQ=255) ct‑GGGGCCGCAAAGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATg > 2:2654320/2‑150 (MQ=255) t‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGc < 2:5114713/150‑1 (MQ=255) t‑GGGGCCGCAAAGCGGACCCAGCGTTCTCTCAGGCCTCAACTTCGATGTGCGGCTCGAAACTGT‑CCG‑CCCTGGCCAGTTGCAACATACGAGAATAGAACTGGCCGTTCACATCGCCGGTCAGCAGCTCACCTGGCTAAAAGAAAACATGc > 2:2687041/1‑150 (MQ=255) ggCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATc > 1:4613670/1‑150 (MQ=255) ggCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATc > 2:2776522/1‑150 (MQ=255) gCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGc > 2:2679356/1‑131 (MQ=255) gCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGc < 1:2679356/131‑1 (MQ=255) gCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCaa > 1:3536274/1‑136 (MQ=255) gCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCaa < 2:3537334/136‑1 (MQ=255) gCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCaa > 1:3537334/1‑136 (MQ=255) gCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCaa < 2:3537330/136‑1 (MQ=255) gCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCaa < 2:3536274/136‑1 (MQ=255) gCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCt > 1:4810213/1‑150 (MQ=255) gCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCt > 1:3789169/1‑150 (MQ=255) ccGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTg > 1:73072/1‑150 (MQ=255) cTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCga < 1:3408213/150‑1 (MQ=255) cTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCga > 2:363014/1‑150 (MQ=255) tttGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCgag > 1:5100686/1‑150 (MQ=255) | TGGCGTACTTCGAGGATACGCGTGTGGCCCTGTACATCGGCCCGGCGTTCCTGGTGTTGCTGACAGTGCTGTATTACACGTTCCGCCTGGCGCCGAAAGACGCACAAGGTGTGACGAGTACAGCCTCCTGACCTGACGT‑GGGGCCGCTTTGCGGCCCCAGCGTTCTCTCAGGCCGCCACTTCGCTGTGCGGCTCGAAACTGT‑CCG‑CCCGGGCCAGTTGCCACATCCGCGAATAGAACTGGCCGTTCACCTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAA > NC_002947/1210686‑1210984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |