| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,243,748 | T→A | 7.4% | intergenic (+31/+68) | tsaA → / ← rnt | peroxiredoxin/ribonuclease T |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,243,748 | 0 | T | A | 7.4% | 561.8 / 24.8 | 180 | intergenic (+31/+68) | tsaA/rnt | peroxiredoxin/ribonuclease T |
| Reads supporting (aligned to +/- strand): ref base T (75/91); new base A (7/6); total (82/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.16e-01 | |||||||||||
Only 100 of 183 total aligned reads displayed.
AGTTCCACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTTCTCGGT > NC_002947/1243599‑1243896 | aGTTCCACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGt < 2:566752/150‑1 (MQ=255)aGTTCCACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGt > 1:3825752/1‑150 (MQ=255)aGTTCCACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGt < 2:1219584/150‑1 (MQ=255) gTTCCACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTg < 1:578781/150‑1 (MQ=255) gTTCCACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTg < 1:1937052/150‑1 (MQ=255) gTTCCACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTg < 2:1666212/150‑1 (MQ=255) ccACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGcc > 2:607945/1‑150 (MQ=255) gAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGtt > 1:4111988/1‑150 (MQ=255) aaGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGttt < 1:135243/150‑1 (MQ=255) agagCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGtttt > 1:1251690/1‑150 (MQ=255) agagCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGtttt < 1:4194483/150‑1 (MQ=255) agagCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGtttt < 2:4774077/150‑1 (MQ=255) gagCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGttttt < 1:1456748/150‑1 (MQ=255) agCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGtttttt < 2:83812/150‑1 (MQ=255) cACTGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACTAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGATTTTTTa < 1:93309/150‑1 (MQ=255) cACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTa < 1:4996702/150‑1 (MQ=255) cACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTa < 1:174693/150‑1 (MQ=255) aCGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTAt < 2:3170781/150‑1 (MQ=255) aCGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTAt > 2:4735253/1‑150 (MQ=255) gAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCtg > 1:5160247/1‑149 (MQ=255) aaGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTc < 2:288904/150‑1 (MQ=255) aaGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTc > 2:3292203/1‑150 (MQ=255) gtgtGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCt < 2:4445179/150‑1 (MQ=255) gCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGc > 1:2957160/1‑150 (MQ=255) cccTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGcc < 1:3948621/150‑1 (MQ=255) cTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTc < 1:3561339/150‑1 (MQ=255) tGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGTCCTCTTcg > 2:825786/1‑150 (MQ=255) aaaaaaGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCgg < 2:3093850/150‑1 (MQ=255) aaaaaaGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCgg > 2:2694108/1‑150 (MQ=255) aaaaaGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCggg < 1:948805/150‑1 (MQ=255) aaaaaGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCggg > 2:4840861/1‑150 (MQ=255) aaaaGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGgc > 2:1550552/1‑150 (MQ=255) aaaaGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGgc < 2:1295482/150‑1 (MQ=255) aaGGCGACAAGGGCATGAACGCTTCGCCTGACGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGgcgc < 2:3957774/150‑1 (MQ=255) aGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGgcgcg > 2:2398529/1‑150 (MQ=255) aGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGgcgcg > 1:4361012/1‑150 (MQ=255) cAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCcgcg < 2:1132184/150‑1 (MQ=255) aaGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGG‑TTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGaa > 2:2091238/1‑150 (MQ=255) tGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCtt < 1:2342752/150‑1 (MQ=255) tGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCtt < 1:3086096/150‑1 (MQ=255) gAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCttt > 2:4142133/1‑150 (MQ=255) gAACGCTTCGCCTGAAGGCGTTGCTGCATACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACAGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCCTCTGCCttt > 1:3693190/1‑150 (MQ=255) aCGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAg < 2:3657003/150‑1 (MQ=255) aCGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAg < 1:5070767/150‑1 (MQ=255) cGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGc < 2:2145996/150‑1 (MQ=255) gCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCa < 2:756547/150‑1 (MQ=255) ttCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGa > 2:732992/1‑150 (MQ=255) ttCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGa > 2:4587860/1‑150 (MQ=255) tCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGAt < 2:3885821/150‑1 (MQ=255) cTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAAt > 2:3107328/1‑150 (MQ=255) tGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTGTAGCAGATCAATc > 1:3142358/1‑150 (MQ=255) gAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCg > 2:4399150/1‑150 (MQ=255) gAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCg > 2:705159/1‑150 (MQ=255) aGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGtt < 1:47369/150‑1 (MQ=255) aGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGtt < 2:3545507/150‑1 (MQ=255) gTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCGTTAGCAGATCAATAGTTGtaa > 1:667480/1‑150 (MQ=255) ctgcCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATcgc < 1:3218707/150‑1 (MQ=255) ccTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGcc > 2:5371665/1‑150 (MQ=255) tGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAg > 2:1427977/1‑120 (MQ=255) gAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAgccgcc > 2:5021911/1‑150 (MQ=255) cGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAt < 2:198176/150‑1 (MQ=255) cGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAt < 1:2694108/150‑1 (MQ=255) cGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCACTTAGCGGGCGCGCCCCCGACTGACTGTAGCAGATAAATCGATTAAATAACGCCCGccccccct > 1:42942/1‑148 (MQ=255) aCGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGGGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAtttctt < 1:3041066/150‑1 (MQ=255) aCGCTGGCAAGCTGTAATTGCGGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAtttctt < 2:2310065/150‑1 (MQ=255) tGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCa < 1:3379826/150‑1 (MQ=255) tGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCa > 2:3658907/1‑150 (MQ=255) tGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTGTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATAAATAGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCa > 2:1418389/1‑150 (MQ=255) cAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCg < 2:297217/150‑1 (MQ=255) cAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCg > 2:3004265/1‑150 (MQ=255) cAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTGCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCg < 1:4060182/150‑1 (MQ=255) aGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGt < 1:718489/150‑1 (MQ=255) aGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGt < 2:3819251/150‑1 (MQ=255) gCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGtt < 2:1146921/150‑1 (MQ=255) tGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGa < 1:2728336/150‑1 (MQ=255) tGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGa < 1:825786/150‑1 (MQ=255) aaTTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGa > 2:4821045/1‑150 (MQ=255) gTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGTTCAATCGTTGAAATAGCGCCAGCCGCCCATTTAGTTGCAGCGGTTGACGGTGCCGCAGa > 1:2877418/1‑150 (MQ=255) tGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCAATTCTTTCCAGCGGTTGACGATGCCGCAGaa > 1:3159906/1‑150 (MQ=255) cATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCAAGCCTTTAGCAGATGAATCGGTGAAATAGCGCCAGCCCCCCCATTCTTTCCAGCGGTTGACGATGCCGCCGaaaa > 1:1021769/1‑148 (MQ=255) cATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACa < 2:4491341/150‑1 (MQ=255) ataaaaaaaCCGGCCACGAAGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCATGCCGTTAGCAGATCAATCGTTGAAATCGCGCCCGCCGCCCCTTTCTTTCCAGCGGGTGACGCTGCCGCCGAACAg > 1:3340797/4‑150 (MQ=255) ataaaaaaaCCGGCCACGAAGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGa < 1:1802415/95‑1 (MQ=37) ataaaaaaaCCGGCCACGAAGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGa > 2:1802415/4‑98 (MQ=37) ataaaaaaaCCGGCCACGAAGGCCGGTTTTTTCATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAg > 1:1776133/4‑150 (MQ=38) taaaaaaaCCGGCCACGAAGGCCGGTTTTTTCATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGc > 2:1791938/3‑150 (MQ=39) gAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGGCCGCGAATGCCTTTAGCAGATCAAACCTTGAACACGCGGCAGCCGCCCATTTGTTTCCAGCGGTTGACGAGTCCGCAGAACAGCt > 1:3195318/1‑150 (MQ=255) gAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCGTTAGCAGATCAATCGTTGAAATAGCGCCAGCCGCCCCTTTCTTTCCAGCGGTTGACGATGCCGCCGAACAGcg > 1:1643964/1‑149 (MQ=255) ataatccGGCGTTCGTGGCCGGTTTTTTTTTGACTTGCTGTGCCGGGCTCTTCGCGGGCGCTCACGCTAATGCCTTTATCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCa < 2:160123/145‑1 (MQ=255) aaaaaCCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGa > 2:5067788/1‑83 (MQ=255) aaaaaCCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGa < 1:5067788/83‑1 (MQ=255) aaaaCCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAg > 2:2525050/1‑150 (MQ=255) aaaaCCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAAGGCCGTTAGCAGATCAAACGGTGGAATCGCGCCACCCGCCCAATTATTTCCACCGGGTGACGATGCCGCCGAACAGCACAg > 1:1035567/1‑150 (MQ=255) ccGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGt > 2:1415252/1‑150 (MQ=255) gCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGtttt < 1:4869177/150‑1 (MQ=255) cTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTATTTCCAGCGGTTGACGATGCCGCCGAACAGCTCAGCGGttttat > 1:5348751/1‑148 (MQ=255) ttCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTtctc > 2:2569520/1‑150 (MQ=255) tCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTTCTCg < 1:607945/150‑1 (MQ=255) tCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTTCTCg < 1:5408559/150‑1 (MQ=255) gcGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTGAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTTCTCg < 2:3515969/149‑1 (MQ=255) | AGTTCCACGAAGAGCACGGCGAAGTGTGCCCTGCCAACTGGAAAAAAGGCGACAAGGGCATGAACGCTTCGCCTGAAGGCGTTGCTGCCTACCTGAGCGAGAACGCTGGCAAGCTGTAATTGCTGCGTGCATGAAAAAACCGGCCTTCGTGGCCGGTTTTTTTATGCCTTCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCGAATGCCTTTAGCAGATCAATCGTTGAAATCGCGCCAGCCGCCCATTTCTTTCCAGCGGTTGACGATGCCGCAGAACAGCTCAGCGGTTTTCTCGGT > NC_002947/1243599‑1243896 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |