| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,443,135 | C→G | 6.5% | intergenic (‑66/+110) | ghrB ← / ← PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,443,135 | 0 | C | G | 6.5% | 338.1 / 2.2 | 117 | intergenic (‑66/+110) | ghrB/PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (53/49); new base G (2/7); total (60/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 120 total aligned reads displayed.
GGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGC > NC_002947/1442986‑1443283 | gggCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTAc < 1:4204897/150‑1 (MQ=255)agattcttgccgcgcatgaggcagacctgaaaacccatcaggtgctgatcgccaactaaaaagctgctgcaatgcgggggcggacaatggtaggttgctaaccattgatttcgcctgttccggcaCCTTCGCGGGCAAGCCCGCTCCTAc > 2:2275725‑M1/126‑150 (MQ=255) gCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACgg < 2:4408579/150‑1 (MQ=255) gCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACgg < 1:2210681/150‑1 (MQ=255) gCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTAcaa < 1:2491155/150‑3 (MQ=39) cAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACggg < 1:2044671/150‑1 (MQ=255) aGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACgggg > 1:1615727/1‑150 (MQ=255) aGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACgggg < 1:5407054/150‑1 (MQ=255) tCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCCACCCCCCACCAAACGGGGGgc > 1:254107/1‑150 (MQ=255) tCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGgc < 2:1615727/150‑1 (MQ=255) gTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGGAAGCCCCCGCCGACCGGGGGGCGCgg > 1:4645530/1‑150 (MQ=255) gTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCCAGCCCCCACCAAACGGGGGGGGCgg > 1:2522432/1‑150 (MQ=255) gTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCgg > 2:3323515/1‑150 (MQ=255) gTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTATTTTTCATCGGGCAACTTCTCTTCAAGGCGGGGTGGGGCTTTGCTGGTCCCTTCGCGGGCAATCCCCCACCAAAGGGGGGGCGCgg > 1:3617309/1‑150 (MQ=255) gTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACCGCTGAAGGCCCGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCCAGCCCCCGCCCACCGGGGGGCGCgg > 1:3675455/1‑150 (MQ=255) ttGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGt < 1:2227096/150‑1 (MQ=255) tGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTg < 1:2878084/150‑1 (MQ=255) tCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCACCTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGGGACCCCCCCCCGACGGGGGGGCGCggggggggg > 1:3402995/1‑143 (MQ=255) tCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCGTg > 2:3826011/1‑150 (MQ=255) gcagacctgaaaacccatcaggtgctgatcgccaactaaaaagctgctgcaatgcgggggcggacaatggtaggttgctaaccattgatttcgcctgttccggcaCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGt > 1:2426736‑M1/106‑150 (MQ=255) cTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGt < 2:2505029/150‑1 (MQ=255) cTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGt < 2:1406649/150‑1 (MQ=255) cTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGt < 2:5200423/150‑1 (MQ=255) cTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGt < 2:5200427/150‑1 (MQ=255) cTTGCTGCAGGCGTTCGGCCATGGCCGAGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGt < 2:1228935/150‑1 (MQ=255) ttGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTa < 1:825275/150‑1 (MQ=255) ttGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTa < 1:3261866/150‑1 (MQ=255) ttGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCGGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTa < 1:1062040/150‑1 (MQ=255) ttGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCGGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTa < 1:81633/150‑1 (MQ=255) gtgctgcAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTa < 2:3787233/149‑1 (MQ=255) gtgctgcAGGCGTTCGGCCATGGCCGGGGGGATCCGGCTGAAGGCCAGGACGGTCTTTTTCCTCGGGCAACGGCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTa < 1:4122117/149‑1 (MQ=255) acctgaaaacccatcaggtgctgatcgccaactaaaaagctgctgcaatgcgggggcggacaatggtaggttgctaaccattgatttcgcctgttccggcaCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGa > 1:9293‑M1/102‑150 (MQ=255) gcAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGc < 1:273402/150‑1 (MQ=255) gcAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGc < 1:273681/150‑1 (MQ=255) ctgaaaacccatcaggtgctgatcgccaactaaaaagctgctgcaatgcgggggcggacaatggtaggttgctaaccattgatttcgcctgttccggcaCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGc > 2:3377519‑M1/100‑150 (MQ=255) tgaaaacccatcaggtgctgatcgccaactaaaaagctgctgcaatgcgggggcggacaatggtaggttgctaaccattgatttcgcctgttccggcaCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCg > 1:483016‑M1/99‑150 (MQ=255) gaaaacccatcaggtgctgatcgccaactaaacagcttctgcaatgcgggggctgacaatggtatgttgctaagctttgatttcgcctgttcaggcaCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTTTAGGAGCgg > 1:4109364‑M1/98‑150 (MQ=255) gaaaacccatcaggtgctgatcgccaactaaaaagctgctgcaatgcgggggcggacaatggtaggttgctaaccattgatttcgcctgttccggcaCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCgg > 1:1848328‑M1/98‑150 (MQ=255) gaaaacccatcaggtgctgatcgccaactaaaaagctgctgcaatgcgggggcggacaatggtaggttgctaaccattgatttcgcctgttccggcaCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCgg > 2:117001‑M1/98‑150 (MQ=255) aaaacccatcaggtgctgatcgccaactaaaaagctgctgcaatgcgggggcggacaatggtaggttgctaaccattgatttcgcctgttccggcaCCTTCGTGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCggg > 1:474661‑M1/97‑150 (MQ=255) aaaacccatcaggtgctgatcgccaactaaaaagctgctgcaatgcgggggcggacaatggtaggttgctaaccattgatttcgcctgttccggcaCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCggg > 1:654282‑M1/97‑150 (MQ=255) gCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGc > 2:1738544/1‑150 (MQ=255) gTTCGGCCATGGCCGGGGTGATACGGCTGAAGTCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCtt < 2:4136211/150‑1 (MQ=25) tCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGc < 2:1995631/150‑1 (MQ=255) cGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGcc > 2:3504585/1‑150 (MQ=255) ggCCATGGCCGGGGTGCTCCGGCGGACGGCCAGGACGGTCTTTTTCCGCGGGCAACGTCTCTGCACGGCGGGGTGGGGCTGGGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGccc < 2:3675455/150‑1 (MQ=255) ggCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCGTGTAGGAGCGGGCTTGccc > 2:557097/1‑150 (MQ=255) ggtgctgatcgccaactaaaaagctgctgcaatgcgggggcggacaatggtaggttgctaaccattgatttcgcctgttccggcaCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCgg > 1:5365396‑M1/86‑138 (MQ=255) ggtgctgatcgccaactaaaaagctgctgcaatgcgggggcggacaatggtaggttgctaaccattgatttcgcctgttccggcaCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCgg < 2:5365396‑M1/53‑1 (MQ=255) gCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGt < 1:2783686/120‑1 (MQ=255) gCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGt > 2:2783686/1‑120 (MQ=255) cGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTg > 2:2522157/1‑150 (MQ=255) aTACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGACGGTGCCGGCAc > 2:5090069/1‑150 (MQ=255) tACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACa > 2:3859575/1‑150 (MQ=255) aCGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCGTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAAccg > 2:1599051/1‑148 (MQ=255) cGGCTGCCGGCCTGGCGGGTCTTTTTCAGCGGGCACGTTCTGTGCTGGGGGGGGTGGGGCTGTGGGGGGCCCGGCGCGGGCACGCCCGCGCCTCGGGGGGGGGGGGGTGCCTTGTCGGCGCGGGCTTGCCCGCGAAGGTGCCGGAACAgg < 2:5260671/150‑1 (MQ=255) taaaaagctgctgcaatgcgggggcggacaatggtaggttgctaaccattgatttcgcctgttccggcaCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCggg > 2:2446241‑M1/70‑123 (MQ=255) taaaaagctgctgcaatgcgggggcggacaatggtaggttgctaaccattgatttcgcctgttccggcaCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCggg < 1:2446241‑M1/54‑1 (MQ=255) gCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCCCACCCCCGCCAACCGGGGGGGGGGGTGGCGTGGTGGGGCGGGGGTGGCCGCGCAGGGGGCCGGACAGGCg > 1:1845/1‑150 (MQ=255) tGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAACCCCCCACCAACGGGGGGGCCCGGTGCCGTGGAGGAGCCGGCGTGCCCCCGCAGGTGCCGGCACAGGCGaa > 1:3910879/1‑150 (MQ=255) tGAAGCCCTGGAGGGTCTTTTTCATCGGGAAACTTCTCTGAACGGGGGGGTGGGGCTGTGCTGGCCCCTTCGCGGGAAAGCCCGCTCCTAGGGGGGGGCGCGGTGCCTTTTAGTAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGaa < 2:3286378/150‑1 (MQ=255) cccggcgggTCTTTTACAGCGGCCAAGTTCGCTGCACGGCGGGGGGGGGCTGGGCTGGTCCGGGCGCGGGCACGCCCGCTCCTAGGGGGGGGCGCGGTGCCTGGTAGGAGGGGGCTGCCCCGCGAAGGTGCCGGAACAGGCGAAATCAAt < 2:4347443/143‑1 (MQ=255) ccggccGGTTTTTTTCTGGGGGCACCTTCGCGGCCCGGGGGGGGGGGGCGGTGCGGGGCCCTTCGGGGTCACCCCCGCTCCCCGGGGGGGGGGCGGTGCCTTGGCGGCGCGGGGTGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATg < 2:727522/145‑1 (MQ=255) cAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCGTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATg > 2:1621715/1‑150 (MQ=255) cgggTCTTTTGCTGCGGGCACGTGCTGGGCACGGGGGGGGGGGGGTGGGCTGGCCCGGGCGCGGGCACGCCGGCGCGTCGGGGGGGGGGGGGGGCGTTGTGGGCGGGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTa < 2:3402995/148‑1 (MQ=255) ggTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCGCCGACGGGGGGGCGCGGTGGCGGGGAGGGGCGGGCTTGCCCGCGAAGGTGGCGGGACAGGCGCAATCAATGGTTAGc > 1:5252275/1‑150 (MQ=255) gacTTTTTCATCGGGCAACTTCTCTTCAATGAGGGGAGGGGATGTGATGGTCCCTTATCGGGCCAACCCGCTCCAAAGGGGGGGCGCGGTGAGGTGTAGGACGGGGCTTTCAAGCCTAGGGGCCCGACCAATCGAAATAAATAGTTAGCa > 2:1836806/3‑150 (MQ=255) tttttCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCGCCTACCGGGGGGCGCGGTGCCTGGTTGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAAcc > 2:1365883/1‑150 (MQ=255) ttttCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCGTGTAGGAGCGGGCTTGCCCGCGAAGGTTCCGGAACAGGCGAAATCAATGGTTAGAAACCt > 2:1630808/1‑150 (MQ=255) ttttCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAACCCCGCTCCTACGGGGGGGGGCGGTGGCGTGTAGGGGCGGGCTTGGCCGCGAAGGTGCCGGGACACGCGGAATAAATGGTTAGCAAcca > 1:4378500/1‑149 (MQ=255) aTCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGGGCCGGGTCGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACCGGCGCAATCAATGGTTAGCAACCTACCag > 2:2567462/1‑149 (MQ=255) cgCACCTTCTCTGCCTGGGGGGGTGGGGGTGTGGTGGTCCCTTGGCGGGCAAGCCCCCGCCGCGGGGGGGGCGGGGTGCCTTGTCGGTGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTc < 2:2378256/149‑1 (MQ=255) gaaccTTCGCTGCTCGGGGGGGTGGGGCTGTGGTGGTCCTTTCGCGGGCACGCCCGCCCCTCGGGGGGGGCGCGGTGCCTTTTAGGCGGGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTcc < 2:4299832/146‑1 (MQ=255) ttCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCCCTCCTACGGGGGGGCGCGGTGCCGTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATAAATGGTTAGCAACCTACCATTGTCCGcccc > 1:5436669/1‑150 (MQ=255) tctcTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGGAAGCCCGCTGCTACGGGGGGGCGGGGTGGCTTGTTGGTGGGGGGGTGGCCGCGGAGGTGGCGGTAAAGGCGAAATCAATTGTTAGGAACCTAGCATTGTGCGgcccc > 2:2290448/1‑150 (MQ=255) tctcTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCAACCATTGTCCGccccc > 1:3548247/1‑150 (MQ=255) tctcTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGAAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGccccc > 1:806869/1‑150 (MQ=255) gCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCCAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGGAGGAGCGGGCTTGCCCGCGCAGGGGCCGGAACAGGCGAAATCAATGGTTAGCAACCGACCCTTGTCCGCCCCCGCAtt > 2:3329343/1‑150 (MQ=255) aaGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGGAAACCCCCTCCAACGGGGGGGCGCGGTGGCGGGTAGGTGCGGGCTTGGCCGCGGAGGTGCCGGGACAGGCGGAATAAAAGGTTTTCAACCAACCAATTTGCGccccccccatgc > 1:5195396/1‑143 (MQ=255) tgtgCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCGTGTGGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCCATGGTTAGCCACCTACCCTTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGtt > 2:3353817/1‑150 (MQ=39) taggaGCGGGCTTGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGc < 1:3152482‑M1/145‑1 (MQ=255) CCTTCGCGGGCAAGCCCGCTCCAAAGGGGGGGCGCGGTGCCGTGTAGGAGCGGGCTTGCCCCCGAAGGTGCCGGAACACGCGAAATCAATGGTTAGCAACCAACCATTGTCCCCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGc < 2:3835466‑M1/150‑1 (MQ=255) CTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCa < 2:3575800‑M1/150‑1 (MQ=255) GCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATgg < 1:162111‑M1/150‑1 (MQ=255) cacgcccgcccCGCCGGGGGGGCGCGGTGCCTGGTTGGAGGGGGCTGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATggg < 2:4645530/147‑1 (MQ=255) CAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATggg < 2:5178978‑M1/150‑1 (MQ=255) cccCCCGCTCCTCGGGGGGGGCGCGGGGCCTTTTCGCCGGGGGCTCCCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGt > 1:3323515‑M1/4‑150 (MQ=255) CCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATg < 1:2833811‑M1/144‑1 (MQ=255) CCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGtttt < 2:316940‑M1/150‑1 (MQ=255) CCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGtttt < 1:5061261‑M1/150‑1 (MQ=255) CCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTc < 1:1612105‑M1/150‑1 (MQ=255) CGCTCCTCCGGGGGGGCGCGGTGCCTTGTAGGAGGGGGGTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCa > 2:3291906‑M1/1‑150 (MQ=255) CGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCa < 1:3765252‑M1/150‑1 (MQ=255) CTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAgg < 1:4285959‑M1/150‑1 (MQ=255) TACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTa < 1:1137060‑M1/115‑1 (MQ=255) TACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTa > 2:1137060‑M1/1‑115 (MQ=255) TACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTg < 2:2543441‑M1/150‑1 (MQ=255) TACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTg < 2:870307‑M1/150‑1 (MQ=255) cCGGGGGGGCGCGGGGCCTTGTCGGAGCGGGCTGGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGc > 2:5195396‑M1/2‑150 (MQ=255) CGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTa > 1:4036939‑M1/1‑113 (MQ=255) | GGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGC > NC_002947/1442986‑1443283 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |