Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,479,362 G→A 5.1% R140H (CGC→CAC)  moaC → cyclic pyranopterin monophosphate synthase accessory protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,479,3620GA 5.1% 493.9 / 9.6 156R140H (CGC→CAC) moaCcyclic pyranopterin monophosphate synthase accessory protein
Reads supporting (aligned to +/- strand):  ref base G (56/92);  new base A (2/6);  total (58/98)
Fisher's exact test for biased strand distribution p-value = 7.11e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 163 total aligned reads displayed.

GCAGGATGCCGTGCGCATCGTCGCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAGGGGGCGTTCAAGGTGCTCGATGATGTGC  >  NC_002947/1479213‑1479510
                                                                                                                                                     |                                                                                                                                                    
gCAGGATGCCGTGCGCATCGTCGCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTgcg                                                                                                                                                      >  1:1846153/1‑150 (MQ=255)
 cAGGATGCCGTGCGCTTCGTCGCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGACAGCGTGGCCGCTCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTgcgc                                                                                                                                                     <  2:3768319/150‑1 (MQ=255)
 cAGGATGCCGTGCGCATCGTCGCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTgcgc                                                                                                                                                     >  2:3025478/1‑150 (MQ=255)
    gATGCCGTGCGCATCGTCACCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCctg                                                                                                                                                  <  1:2404191/150‑1 (MQ=255)
       gCCGTGCGCATCGTCGCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGCGCACctgctc                                                                                                                                               <  2:65133/150‑2 (MQ=255)
         cGTGCGCATCGTCGCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGa                                                                                                                                             <  1:5360894/150‑1 (MQ=255)
          gTGCGCATCGTCGCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGaa                                                                                                                                            <  2:3616803/150‑1 (MQ=255)
          gTGCGCATCGTCGCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCCAGCAGGCGCACCTGCTCGat                                                                                                                                            <  2:15861/150‑2 (MQ=255)
           tGCGCATCGTCGCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGCGCACCTGCTCGatg                                                                                                                                           <  1:156843/150‑3 (MQ=255)
           tGCGCATCGTCGCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGCGCACCTGCTCGatg                                                                                                                                           <  2:4110694/150‑3 (MQ=255)
             cgcATCGTCGCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGaaaaa                                                                                                                                         <  1:4242431/150‑1 (MQ=255)
              gcATCGTCGCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAAc                                                                                                                                        >  1:1215569/1‑150 (MQ=255)
                 tcgtcgCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCg                                                                                                                                     <  2:2076894/150‑1 (MQ=255)
                 tcgtcgCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCg                                                                                                                                     <  2:1936995/150‑1 (MQ=255)
                  cgtcgCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCgg                                                                                                                                    <  2:1654265/150‑1 (MQ=255)
                    tcgCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTg                                                                                                                                  >  1:287342/1‑150 (MQ=255)
                          gCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAaga                                                                                                                            <  1:4543651/150‑1 (MQ=255)
                          gCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAaga                                                                                                                            <  1:787802/150‑1 (MQ=255)
                          gCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAaga                                                                                                                            >  1:863307/1‑150 (MQ=255)
                           cTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAagag                                                                                                                           >  2:1739096/1‑150 (MQ=255)
                             gCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTg                                                                                                                         <  1:1739096/150‑1 (MQ=255)
                                 gCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCg                                                                                                                                     <  1:2274038/134‑1 (MQ=255)
                                 gCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCg                                                                                                                                     >  2:2274038/1‑134 (MQ=255)
                                 gCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCa                                                                                                                     <  2:701963/150‑1 (MQ=255)
                                 gCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCa                                                                                                                     <  2:702059/150‑1 (MQ=255)
                                   tGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACt                                                                                                                   <  1:1954776/150‑1 (MQ=255)
                                    ggCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTa                                                                                                                  <  1:2621849/150‑1 (MQ=255)
                                     gCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTAc                                                                                                                 <  1:5221781/150‑1 (MQ=255)
                                       cGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACaa                                                                                                               <  2:2424323/150‑1 (MQ=255)
                                       cGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACaa                                                                                                               >  1:610587/1‑150 (MQ=255)
                                       cGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACaa                                                                                                               <  1:5118947/150‑1 (MQ=255)
                                         ggCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTAGCCACTACAAgg                                                                                                             <  1:4031166/150‑1 (MQ=255)
                                          gCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGt                                                                                                            >  2:3419992/1‑150 (MQ=255)
                                             gACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGa                                                                                                         <  2:1596678/150‑1 (MQ=255)
                                              aCCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGaa                                                                                                                                            >  1:5133499/1‑114 (MQ=255)
                                              aCCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAg                                                                                                        >  1:4725008/1‑150 (MQ=255)
                                                cGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCaa                                                                                                                              >  1:3861199/1‑126 (MQ=255)
                                                 ggTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGTGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCg                                                                                                     <  1:4015967/150‑1 (MQ=255)
                                                  gtgtGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCg                                                                                                                                     <  2:716964/117‑1 (MQ=255)
                                                  gtgtGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCg                                                                                                                                     >  1:716964/1‑117 (MQ=255)
                                                  gtgtGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGt                                                                                                    <  2:2971078/150‑1 (MQ=255)
                                                  gtgtGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGt                                                                                                    <  1:2043925/150‑1 (MQ=255)
                                                     tgGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGtgat                                                                                                 >  2:2549058/1‑150 (MQ=255)
                                                     tgGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGtgat                                                                                                 >  2:1184567/1‑150 (MQ=255)
                                                     tgGAGATGGAGGCGCTGACCGCCGCCAGCGGGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTCTGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGtgat                                                                                                 >  2:2310183/1‑150 (MQ=255)
                                                      ggAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGtgatg                                                                                                >  2:2126267/1‑150 (MQ=255)
                                                      ggAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGtgatg                                                                                                >  2:4042037/1‑150 (MQ=255)
                                                       gagaTGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCgg                                                                                                                                    <  2:3490137/113‑1 (MQ=255)
                                                       gagaTGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCgg                                                                                                                                    >  1:3490137/1‑113 (MQ=255)
                                                        agaTGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGaa                                                                                              <  1:1067996/150‑1 (MQ=255)
                                                         gaTGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAg                                                                                             <  1:2313199/150‑1 (MQ=255)
                                                         gaTGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAg                                                                                             <  1:5171027/150‑1 (MQ=255)
                                                         gaTGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAg                                                                                             <  1:1624430/150‑1 (MQ=255)
                                                              aGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCaa                                                                                        >  2:4329151/1‑150 (MQ=255)
                                                                 cgcTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGt                                                                                     <  1:4093740/150‑1 (MQ=255)
                                                                   cTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGa                                                                                   <  2:3121184/150‑1 (MQ=255)
                                                                   cTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGa                                                                                   <  2:4296065/150‑1 (MQ=255)
                                                                    tGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGAt                                                                                  >  2:5274700/1‑150 (MQ=255)
                                                                    tGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGAt                                                                                  <  1:3364921/150‑1 (MQ=255)
                                                                    tGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGAt                                                                                  <  1:3364853/150‑1 (MQ=255)
                                                                    tGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGAt                                                                                  >  1:799732/1‑150 (MQ=255)
                                                                        cgccgcCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTAc                                                                              <  1:1400247/150‑1 (MQ=255)
                                                                        cgccgcCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTAc                                                                              >  1:4728150/1‑150 (MQ=255)
                                                                               aGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGccc                                                                       <  1:5118430/150‑1 (MQ=255)
                                                                                  gTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGtt                                                                    <  1:422984/150‑1 (MQ=255)
                                                                                  gTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGtt                                                                    <  2:4850872/150‑1 (MQ=255)
                                                                                  gTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGtt                                                                    <  1:4294020/150‑1 (MQ=255)
                                                                                                gATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTg                                                      >  1:5401452/1‑150 (MQ=255)
                                                                                                    tATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGa                                                                                                         >  2:140434/1‑95 (MQ=255)
                                                                                                    tATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCg                                                  <  1:1419703/150‑1 (MQ=255)
                                                                                                    tATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCg                                                  >  2:2843558/1‑150 (MQ=255)
                                                                                                     aTGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGt                                                 <  1:3300957/150‑1 (MQ=255)
                                                                                                     aTGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGt                                                 <  2:2835700/150‑1 (MQ=255)
                                                                                                      tGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTg                                                >  1:404835/1‑150 (MQ=255)
                                                                                                        aCATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGa                                              >  1:4813335/1‑150 (MQ=255)
                                                                                                         cATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGtga                                                                                                  >  2:2038932/1‑97 (MQ=255)
                                                                                                          aTGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATg                                            >  2:1231270/1‑150 (MQ=255)
                                                                                                            gtgCACGGCTGGGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGcc                                          >  2:1034975/1‑150 (MQ=255)
                                                                                                             tgCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCg                                         >  2:3417979/1‑150 (MQ=255)
                                                                                                               cAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAg                                       >  2:940526/1‑150 (MQ=255)
                                                                                                                   gCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCggg                                   <  1:2060322/150‑1 (MQ=255)
                                                                                                                    cTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGt                                  >  1:1143620/1‑150 (MQ=255)
                                                                                                                    cTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGt                                  <  1:3025478/150‑1 (MQ=255)
                                                                                                                      gtgGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTgg                                >  2:5079874/1‑150 (MQ=255)
                                                                                                                        ggATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAg                              <  1:3417979/150‑1 (MQ=255)
                                                                                                                         gATTAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAATCTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGGGTGATGAAGGTCATTGTGATGTACTTCGCCCGTTTCCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAgg                             >  2:842128/1‑150 (MQ=255)
                                                                                                                         gATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGt                                  >  2:823358/1‑145 (MQ=255)
                                                                                                                         gATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAgg                             >  1:2831164/1‑150 (MQ=255)
                                                                                                                          aTAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAggg                            <  1:2774918/150‑1 (MQ=255)
                                                                                                                            aaaGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAggggg                          <  2:2757812/150‑1 (MQ=255)
                                                                                                                             aaGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAGGGGGc                         <  2:2692098/150‑1 (MQ=255)
                                                                                                                                     gTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAGGGGGCGTTCAAgg                 >  1:4886439/1‑150 (MQ=255)
                                                                                                                                      tCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTgg                                                     >  2:183536/1‑113 (MQ=255)
                                                                                                                                      tCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAGGGGGCGTTCAAGGt                <  1:3534873/150‑1 (MQ=255)
                                                                                                                                          ccaGCAGGCGCACCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAGGGGGCGTTCAAGGTGCTc            >  2:4250250/3‑150 (MQ=255)
                                                                                                                                            aGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAGGGGGCGTTCAAGGTGCTCga          <  2:1846153/150‑1 (MQ=255)
                                                                                                                                             gCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAGGGGGCGTTCAAGGTGCTCgat         >  2:4752974/1‑150 (MQ=255)
                                                                                                                                                 gTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAGGGGGCGTTCAAGGTGCTCGatgatg     >  2:1198737/1‑150 (MQ=255)
                                                                                                                                                 gTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAGGGGGCGTTCAAGGTGCTCGatgatg     >  2:537795/1‑150 (MQ=255)
                                                                                                                                                    cgcCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAGGGGGCGTTCAAGGTGCTCGATGATGTgc  <  2:2700848/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GCAGGATGCCGTGCGCATCGTCGCCCGCTGCAAGCTGGCCGGGCAGACCGGTGTGGAGATGGAGGCGCTGACCGCCGCCAGCGTGGCCGCGCTGACGATCTATGACATGTGCAAGGCTGTGGATAAAGGTATGGTCATCGAGCAGGTGCGCCTGCTGGAAAAACTCGGTGGCAAGAGTGGCCACTACAAGGTGGAGGCGTGATGAAGGTCAAAGTGATGTACTTCGCCCGTTACCGCGAACTGTTGGGCGTGGATGCCGAGCGGGTGGAGGGGGCGTTCAAGGTGCTCGATGATGTGC  >  NC_002947/1479213‑1479510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: