| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 1,843,229 | (GCGCCAGTTCGTGGC)1→2 | coding (1607/2754 nt) | gacS ← | sensor protein GacS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1843211 = | 25 (0.090) | 195 (0.760) | 112/286 | 1.0 | 91.0% | coding (1625/2754 nt) | gacS | sensor protein GacS |
| ? | NC_002947 | = 1843225 | 14 (0.050) | coding (1611/2754 nt) | gacS | sensor protein GacS | |||||
Only 100 of 397 total aligned reads displayed.
AGGTTGGCACCGAGCACCGCGAACTCGAAGGGCAGGCCGGCCTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGAACTGCGAACCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCCATCTG > NC_002947/1843076‑1843374 | gTTGGCACCGAGCACCGCGAACTCGAAGGGCAGGCCGGCCTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtg > 1:1044282‑M2/1‑148 (MQ=255) cgcgaactcgaagggcaggccggcctggctggcggcctgcaccccctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgtggcgcgccagttcgtg < 1:5281899‑M1/17‑1 (MQ=255) gCACCGAGCACCGCGAACTCGAAGGGCAGGCCGGCCTGGCTGGCGGTCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgc < 1:1192809‑M2/150‑7 (MQ=255) gCACCGAGCACCGCGAACTCGAAGGGCAGGCCAGCCTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgc < 2:772438‑M2/150‑7 (MQ=255) cACCGAGCACCGCGAACTCGAAGGGCAGGCCGGCCTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCgcctgcac > 2:1991743/1‑143 (MQ=255) aCCGAGCACCGCGAACTCGAAGGGCAGGCCGGCCTGGCTGGCGGCCTGCACCCCCTGATGCATCTGGTCGTTGGAGGCTAACAGGCTCACGCTGAGGCCGCAGTATTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTAGtggcgcgc > 1:2783673‑M2/1‑142 (MQ=255) gaagggcaggccggcctggctggcggcctgcaccccctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGAc < 2:1351230‑M1/26‑1 (MQ=255) cACCGCGAACTCGAAGGGCAGGCCGGCCTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttc < 1:4207720‑M2/150‑15 (MQ=255) ccGCGAACTCGAAGGGCAGGCCGGCCTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgt > 1:4693985‑M2/1‑134 (MQ=255) gcgAACTCGAAGGGCAGGCCGGCCTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtgg > 2:4802528‑M2/1‑132 (MQ=255) aggccggcctggctggcggcctgcaccccctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATggcg > 1:401391‑M1/118‑150 (MQ=255) gccggcctggctggcggcctgcaccccctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATggcggc < 2:1040490‑M1/35‑1 (MQ=255) ccggcctggctggcggcctgcaccccctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCa < 2:183295‑M1/36‑1 (MQ=255) aaCTCGAAGGGCAGGCCGGCCTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCCGTTCGtggcgcgccagttcgtggcca < 2:3380419‑M2/150‑22 (MQ=255) cggcctggctggcggcctgcaccccctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCAc > 1:5585390‑M1/114‑150 (MQ=255) tCGAAGGGCAGGCCGGCCTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcg < 2:2135565‑M2/150‑25 (MQ=255) tCGAAGGGCAGGCCGGCCTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcg < 2:4369481‑M2/150‑25 (MQ=255) gcctggctggcggcctgcaccccctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCAcgg > 1:1118231‑M1/112‑150 (MQ=255) gAAGGGCAGGCCGGCCTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgac < 1:3037493‑M2/150‑27 (MQ=255) ctggctggcggcctgcaccccctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCAcggcg < 2:2675461‑M1/41‑1 (MQ=255) ctggctggcggcctgcaccccctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCAcggcg > 1:5569010‑M1/110‑150 (MQ=255) ggctggcggcctgcaccccctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGGTCGTGGCCATCGACAATGGCGGCACggcggc < 2:2399985‑M1/43‑1 (MQ=255) tggcggcctgcaccccctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgcccgttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCa < 2:27227‑M1/46‑1 (MQ=255) tggcggcctgcaccccctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCa < 1:3519982‑M1/46‑1 (MQ=255) ggccggccTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcgg > 2:3335732‑M2/1‑116 (MQ=255) gccggccTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggc < 1:3076672‑M2/150‑36 (MQ=255) gcctgcaccccctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAAt > 2:655544‑M1/100‑150 (MQ=255) ctgcaccccctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATgg < 1:2623107‑M1/53‑1 (MQ=255) ccTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggc > 1:2796444‑M2/1‑110 (MQ=255) ctggctggCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcg > 1:2850697‑M2/1‑109 (MQ=255) ctggcGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggccc > 1:1243593‑M2/1‑105 (MQ=255) ctgcagcaactggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTgg > 2:5589423‑M1/89‑150 (MQ=255) ctggtcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTc < 2:60110‑M1/71‑1 (MQ=255) cccccTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcg > 2:3037493‑M2/1‑92 (MQ=255) ccccTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGc > 1:5688179/1‑150 (MQ=255) tcgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCCATGGCTGCGGTGGCAGCGCTTCGGCa < 1:143377‑M1/75‑1 (MQ=255) cgtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCAt > 1:4470649‑M1/75‑150 (MQ=255) cgtaggaggcgaacaggctcacgctgaggccgcagtcttcaagctggtgctccagtgcctggcgcgccagttagTGGCGCGCCAGTTAGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCAt < 2:2460390‑M1/76‑1 (MQ=255) gtaggaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtacctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATc > 2:3681996‑M1/74‑150 (MQ=255) cTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtgg > 2:4423306‑M2/1‑88 (MQ=255) gaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCa < 2:5477524‑M1/81‑1 (MQ=255) gaggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCa < 1:5603664‑M1/81‑1 (MQ=255) agcaACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagc < 2:4548514‑M2/150‑67 (MQ=255) agcaACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagc < 1:4880557‑M2/150‑67 (MQ=255) aggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCAt > 2:5180240‑M1/69‑150 (MQ=255) ggcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATg < 1:3775989‑M1/83‑1 (MQ=255) gcgaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGa < 2:1642867‑M1/84‑1 (MQ=255) gaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGc < 2:1292802‑M1/86‑1 (MQ=255) gaacaggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCACCAATGGCTGCGGTGGCAGCGCATCGGCATCGTCATGAGc < 1:3879268‑M1/86‑1 (MQ=255) tGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcg < 1:2153942‑M2/150‑73 (MQ=255) tGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcg < 2:3350368‑M2/150‑73 (MQ=255) gTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggc > 2:4301736‑M2/1‑76 (MQ=255) caggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCtt > 1:1697477‑M1/62‑150 (MQ=255) ggctcacgctgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTgg > 1:3808001‑M1/60‑150 (MQ=255) aggaggCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgt > 2:422042‑M2/1‑71 (MQ=255) ggaggCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtc > 1:1273804‑M2/1‑70 (MQ=255) tgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGa > 2:1493368‑M1/51‑150 (MQ=255) tgaggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGa < 2:5262504‑M1/100‑1 (MQ=255) aggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAgg > 2:599287‑M1/49‑150 (MQ=255) ggccgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGc > 1:5415229‑M1/48‑150 (MQ=255) aGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttg > 1:2327279‑M2/1‑60 (MQ=255) ggCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcggcaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttgg > 2:393689‑M2/1‑59 (MQ=255) cgcagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCtgt < 2:1562612‑M1/106‑2 (MQ=255) gCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttggg > 1:2169455‑M2/1‑58 (MQ=255) gCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttggg < 2:2723029‑M2/150‑93 (MQ=255) cagtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATc > 2:2710060‑M1/43‑150 (MQ=255) tCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcggcgcttcggcatcgtcatgagccttgggca > 1:4239467‑M2/1‑56 (MQ=255) tCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttgggca < 1:3311590‑M2/150‑95 (MQ=255) agtcttccagctggtgctccagtgcctggggcgcccggtggTGGGGCGCCAGTTAGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGGAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGTGGCTGATcc < 1:1487966‑M1/109‑1 (MQ=255) agtcttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATcc < 2:1668908‑M1/109‑1 (MQ=255) aCGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttgggcagg > 1:3350368‑M2/1‑54 (MQ=255) cGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttgggcaggt > 1:1991743‑M2/1‑53 (MQ=255) ttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGaa < 1:3907058‑M1/113‑1 (MQ=255) ttccagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGaa > 2:5348713‑M1/38‑150 (MQ=255) cagctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCAACGACAATTGCGGCACGGCGGCCCAGCAAAGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGaacag < 1:973270‑M1/116‑3 (MQ=255) agctggtgctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGAACTGc > 1:3981408‑M1/34‑150 (MQ=255) ccGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGAACTGCGaa > 2:5096169/1‑150 (MQ=255) gCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttgggcaggttgaggctgat < 2:4658742‑M2/150‑108 (MQ=255) gctccagtgcctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGAACTGCGAACCtt > 2:62348‑M1/27‑150 (MQ=255) gTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttgggcaggttgaggctgatcca > 1:3456767‑M2/1‑40 (MQ=255) ttCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttgggcaggttgaggctgatccagaa > 2:4096978‑M2/1‑37 (MQ=255) tCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccaggtcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccgtgggcagggtgaggctgatccagaac < 1:256190‑M2/150‑115 (MQ=255) cctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGAACTGCGAACCTTCGCCCgggg < 1:2743120‑M1/133‑1 (MQ=255) ctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGAACTGCGAACCTTCGCCCGGGGt < 2:1951049‑M1/134‑1 (MQ=255) ctggcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGAACTGCGAACCTTCGCCCGGGGt < 2:3556835‑M1/134‑1 (MQ=255) ggTGCTCCAGGGCCTGGCTCGACAGTTCGtggcgcgccagttcgtggccatcgaccatggcggcacggcggcacagcaatggctgcggtggcagcgcttcttcatcgtcatgagcctttggcaggttgaggctgatccagaactgcgaac > 1:1296158‑M2/1‑29 (MQ=255) gcgcgccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGAACTGCGAACCTTCGCCCGGGGTACt < 1:2273797‑M1/137‑1 (MQ=255) tGCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttgggcaggttgaggctgatccagaactgcgaacct < 1:3219874‑M2/150‑124 (MQ=255) gCTCCAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttgggcaggttgaggctgatccagaactgcgaacctt > 1:3394542‑M2/1‑26 (MQ=255) gccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGAACTGCGAACCTTCGCCCGGGGTACTGTCg < 1:816268‑M1/141‑1 (MQ=255) gccagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGAACTGCGAACCTTCGCCCGGGGTACTGTCg < 1:656793‑M1/141‑1 (MQ=255) cagttcgTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCTTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGAACTGCGAACCTTCGCCCGGGGTACTGTCGac < 1:84067‑M1/143‑1 (MQ=255) cAGTGCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttgggcaggttgaggctgatccagaactgcgaaccttcgcc < 2:289384‑M2/150‑129 (MQ=255) gCCTGGCGCGCCAGTTCGtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttgggcaggttgaggctgatccagaactgcgaaccttcgcccggg < 2:4134110‑M2/150‑133 (MQ=255) gccagttcgtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttgggcaggttgaggctgatccagaactgcgaaccttcgcccggggtactgtcg < 2:4062608‑M2/150‑142 (MQ=255) gcCAGGACGTGGCCATCGACAATGGCGGCACGCCGCCCCAGCAATGGCTGCGGAGGCAGCGCTTCGGCATCGTCATGACCCTTGGGCAGGTTGAGGCTGATCCAGAACTGCGAACCTTCGCCCGGGGTACTGTCGACACCGAGCTcgccg > 2:3194540/1‑150 (MQ=255) ccagttcgtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcatcgtcatgagccttgggcaggttgaggctgatccagaa < 1:2921174‑M2/121‑114 (MQ=255) cagttcgtggcgcgccagttcgtggccatcgacaatggcggcacggcggcccagcaatggctgcggtggcagcgcttcggcctcgtcatgagccttgggcaggttgaggctgatccagaactgcgacccttcgcccggggtcctgtcgac < 2:4917972‑M2/150‑144 (MQ=255) cAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGAACTGCGAACCTTCGCCCGGGGTACTGTCGACACCGATCTCgccgcc > 1:1909944/1‑150 (MQ=255) cGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGAACTGCGAACCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCCATCt < 2:3795590/150‑1 (MQ=255) | AGGTTGGCACCGAGCACCGCGAACTCGAAGGGCAGGCCGGCCTGGCTGGCGGCCTGCACCCCCTGCAGCAACTGGTCGTAGGAGGCGAACAGGCTCACGCTGAGGCCGCAGTCTTCCAGCTGGTGCTCCAGTGCCTGGCGCGCCAGTTCGTGGCCATCGACAATGGCGGCACGGCGGCCCAGCAATGGCTGCGGTGGCAGCGCTTCGGCATCGTCATGAGCCTTGGGCAGGTTGAGGCTGATCCAGAACTGCGAACCTTCGCCCGGGGTACTGTCGACACCGATCTCGCCGCCCATCTG > NC_002947/1843076‑1843374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |