New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1847008 =485 (1.000)41 (0.130)
+AACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCT
11/200 23.6 11.2% coding (1257/1377 nt) pfeS‑II histidine kinase
?NC_002947 2437200 = NA (NA)intergenic (+82/‑222) PP_2133/PP_2134 hypothetical protein/transposase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 193 total aligned reads displayed.

CAACCCGCGTTTGCCATTCTGCGCCCACAAGGTGCCGCCCTGGCGCTGGATGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1847062‑1847008
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCGCGAG  >  NC_002947/2437200‑2437347
                                                       ||||||||||||||||||||||||||||||||||||||||||||||||                                                                                                                                                    
CAACCCGCGTTTGCCATTCTGCGCCCACAAGGTGCCGCCCTGGCGCTGGATGGCACTGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGA                                                                                                       >  1:6673602/1‑149
      GCGTTTGCCATTCTGCGCCCACAAGGTGCCGCCCTGGCGCTGGATGACACTGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCA                                                                                                 >  2:7021832/1‑149
        GTTTGCCATTCTGCGCCCACAAGGTGCCGCCCTGGCGCTGGATGGCAAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCAT                                                                                                >  1:1100352/1‑149
         TTTGCCATTCTGCGCCCACAAGGTGCCGCCCTGGCGCTGGATGGCAAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATA                                                                                               >  1:7619509/1‑149
           TGCCATTCTGCGCCCACAAGGTGCCGCCCTGGCGCTGGATGGCAAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAAC                                                                                             >  2:3687279/1‑149
             CCATTCTGCGCCCACAAGGTGCCGCCCTGGCGCTGGATGGCAAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTC                                                                                           >  1:1287268/1‑149
              CATTCTGCGCCCACAAGGTGCCGCCCTGGCGCTGGATGGCAAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCG                                                                                          >  1:1231666/1‑149
              CATTCTGCGCCCACAAGGTGCCGCCCTGGCGCTGGATGGCAAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCG                                                                                          >  1:6442630/1‑149
              CATTCTGCGCCCACAAGGTGCCGCCCTGGCGCTGGATGGCAAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCG                                                                                          >  1:8915055/1‑149
              CATTCTGCGCCCACAAGGTGCCGCCCTGGCGCTGGATGGCACTGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGC                                                                                         >  1:288758/1‑149
               ATTCTGCGCCCACAAGGTGCCGCCCTGGCGCTGGATGGCTCTGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCT                                                                                        >  2:1814655/1‑149
                         CACAAGGTGCCGCCCTGGCGCTGGATGGCAAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGT                                                                               >  1:8794467/1‑149
                                                 ATGGCAAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGA                                                       <  1:7248289/149‑1
                                                  TGGCAAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTCGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAA                                                      <  1:9256237/149‑1
                                                     CAAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATC                                                   >  1:3027500/1‑149
                                                     CAAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATC                                                   <  1:1673771/149‑1
                                                      AAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCA                                                  <  1:8183499/149‑1
                                                      AAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCA                                                  <  1:8039843/149‑1
                                                      AAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCA                                                  <  2:3406022/149‑1
                                                      AAACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGCTAAACCCGATTGTATGCTAGGACTAGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCA                                                  <  2:7771405/149‑1
                                                      AAACGCGGGTTGCGCTTGAGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGCTAAACCCGCTAGTATGGTAGGACTAGAAGGGAGGAGGAGGGCCATAACTCGCTTATGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCA                                                  >  1:1758909/1‑149
                                                       AACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCAC                                                 <  2:1482158/149‑1
                                                       AACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCAC                                                 >  1:5709836/1‑149
                                                        ACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACC                                                <  1:5121452/149‑1
                                                        ACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACC                                                <  2:3079864/149‑1
                                                        ACGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGGATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTAGTGGCCGTAGGAGAAATCACC                                                <  2:7133496/149‑1
                                                        ACGCGGGTTGCGCTTGTGGATGAGGGTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGCGCCCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACC                                                <  1:5324107/149‑1
                                                         CGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCC                                               >  2:9304099/1‑149
                                                         CGCGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCC                                               <  2:5798792/149‑1
                                                           CGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCT                                             >  2:2361692/1‑149
                                                           CGGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGATTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCT                                             <  1:221055/149‑1
                                                           CGGGTTGCGCTTGTGGATGAGGGTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCT                                             <  2:5230992/149‑1
                                                            GGGTTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTC                                            <  2:7832687/149‑1
                                                               TTGCTCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTC                                         <  2:1961058/149‑1
                                                               TTGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTC                                         >  1:6574214/1‑149
                                                                TGCGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCCCCCCTCCTCC                                        <  2:10315927/149‑1
                                                                 GCGCTTGTGGATGAGGCTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGATTGTATGGTAGGACTTGAAGGGAGCACCACCCCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCT                                       <  2:4784387/149‑1
                                                                  CGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTT                                      <  1:8689371/149‑1
                                                                  CGCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTT                                      <  2:7659088/149‑1
                                                                   GCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGTCTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTT                                     <  2:3373711/149‑1
                                                                   GCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTT                                     <  1:6078746/149‑1
                                                                   GCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTT                                     <  2:858890/149‑1
                                                                   GCTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGACGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTT                                     <  1:7983696/149‑1
                                                                    CTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTC                                    >  1:6089319/1‑149
                                                                    CTTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTC                                    >  2:6968809/1‑149
                                                                     TTGTGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGTCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCA                                   <  2:1289084/149‑1
                                                                      TGTGGATGAGGTTGCCGTTGCTTGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATTACTCGCTTCTGAGTGTTCGCGCTGTACAGACCGTAGGAGAAATCACCCCTCCTCGTTTCAA                                  >  2:9151869/1‑149
                                                                        TGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACA                                >  2:3881901/1‑149
                                                                        TGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACA                                >  2:6572103/1‑149
                                                                        TGGATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACA                                <  1:904025/149‑1
                                                                          GATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACC                              <  2:288758/149‑1
                                                                          GATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACC                              >  2:8912836/1‑149
                                                                           ATGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCC                             >  1:10323485/1‑149
                                                                            TGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCA                            <  1:4274963/149‑1
                                                                            TGAGGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCA                            >  1:2364163/1‑149
                                                                              tgggTGCCGTTTCATGTGCCTGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGCGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACGCCTCCTCCTTTCTACACCCAAG                          <  1:169535/145‑1
                                                                               GGTTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGC                         >  1:2431084/1‑149
                                                                                 TTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGC                       >  1:4040346/1‑149
                                                                                 TTGCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGC                       >  1:5440471/1‑149
                                                                                   GCCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCG                     >  1:8049457/1‑149
                                                                                    CCGTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGA                    <  2:6393003/149‑1
                                                                                      GTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATGACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGCGAAATCACCCCTCCTCCGTTCAACACCCACGCGCCGAga                  >  2:7203950/1‑147
                                                                                      GTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATA                  <  2:9463569/149‑1
                                                                                      GTTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATA                  >  2:7203949/1‑149
                                                                                       TTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAA                 >  2:6268261/1‑149
                                                                                       TTGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAA                 <  2:1608776/149‑1
                                                                                        TGCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAG                >  1:2711901/1‑149
                                                                                         GCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGG               <  2:2673795/149‑1
                                                                                         GCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGG               <  1:8182411/149‑1
                                                                                         GCATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGG               <  1:2884413/149‑1
                                                                                          CATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGA              <  2:7252622/149‑1
                                                                                           ATGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAA             <  1:162548/149‑1
                                                                                            TGTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAAT            >  1:6874092/1‑149
                                                                                             GTGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGAGAAGGAATG           >  2:8298746/1‑149
                                                                                              TGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGC          >  2:9036229/1‑149
                                                                                              TGCCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGC          >  1:1971260/1‑149
                                                                                               GCCGGCCTCTTCGCGGGTAAACCCACTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCC         <  1:9584173/149‑1
                                                                                                CCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCT        >  1:4837455/1‑149
                                                                                                CCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCT        <  2:301213/149‑1
                                                                                                CCGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCT        <  2:2648214/149‑1
                                                                                                 CGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTC       >  1:4169804/1‑149
                                                                                                 CGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTC       <  1:9792526/149‑1
                                                                                                 CGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTC       >  1:555639/1‑149
                                                                                                 CGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTC       >  2:7418868/1‑149
                                                                                                 CGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTC       >  1:8050385/1‑149
                                                                                                  GGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGACATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCG      >  1:7861316/1‑149
                                                                                                  GGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCG      <  2:3770960/149‑1
                                                                                                  GGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCG      >  1:5631589/1‑149
                                                                                                  GGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCG      <  2:1800982/149‑1
                                                                                                   GCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCGC     >  1:5775547/1‑149
                                                                                                    CCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCGCG    >  2:4583129/1‑149
                                                                                                    CCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCGCG    >  1:8803120/1‑149
                                                                                                    CCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCGCG    <  1:7682028/149‑1
                                                                                                    CCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCGCG    <  2:433741/149‑1
                                                                                                     CTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCGCGA   <  2:9611395/149‑1
                                                                                                     CTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCGCGA   <  2:2511476/149‑1
                                                                                                      TCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCGCGAG  >  2:3673740/1‑149
                                                                                                      TCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCGCGAG  >  2:185340/1‑149
                                                                                                      TCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCGCGAG  >  1:91854/1‑149
                                                                                                      TCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCGCGAG  <  1:1055146/149‑1
                                                       ||||||||||||||||||||||||||||||||||||||||||||||||                                                                                                                                                    
CAACCCGCGTTTGCCATTCTGCGCCCACAAGGTGCCGCCCTGGCGCTGGATGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1847062‑1847008
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCAAGCGCCGATAAGGAATGCCTCGCGAG  >  NC_002947/2437200‑2437347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.