New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4539515 = | NA (NA) | 60 (0.130) | 16/286 | 26.1 | 46.3% | coding (884/1533 nt) | PP_4025 | transposase |
? | NC_002947 | = 4628624 | 72 (0.150) | coding (848/1533 nt) | PP_4091 | transposase | |||||
Rejected: Coverage evenness skew score above cutoff. |
TCGCGTGCAGGTGCTCAAAGAGCCGGATCGTGATCCGACCAGTCAATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCA > NC_002947/4539369‑4539608 | tctcgTGCAGGTGCACAAAGAGCCGGATCGTGATCCGACCAGTCTATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGTTCGTCAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAgg < 1:8757532/146‑1 (MQ=1) tctaTCCTTGATGTGGTTGCAGGCCAGTGGCCCGCCTGATCGTCAAGTCGTGCTGTTCTATTACACCACCAGCCGCGCTCAGGATGTGCCGCTGCGCCTGCTGGAGGGATATCGCGGTTACGTGATGACCGATTATTACGCCGGTTACa < 2:690192/146‑1 (MQ=1) tcaggcgggCCACTGGCCTGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTa > 1:8416493/8‑149 (MQ=0) aggcgggCCACTGGCCTGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACa > 1:874866/6‑149 (MQ=0) gttcTGTTCGATTACACCACCAGCCGCTCGCAGGAGGTGCCGCTGCGACTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATTATTACGCCGGTTACAACGCGTTGGCGCTACAGACGGGCGTTGAACGACTGGCGTGCATGGCGCa < 1:5228243/146‑1 (MQ=1) | TCGCGTGCAGGTGCTCAAAGAGCCGGATCGTGATCCGACCAGTCAATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCA > NC_002947/4539369‑4539608 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |