New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4539479 =	NA (NA)	61 (0.130)	16/286	26.1	NA	coding (848/1533 nt)	PP_4025	transposase
	?	NC_002947	4539515 =	NA (NA)					coding (884/1533 nt)	PP_4025	transposase
Rejected: Coverage evenness skew score above cutoff.

TCGCGTGCAGGTGCTCAAAGAGCCGGATCGTGATCCGACCAGTCAATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCA  >  NC_002947/4539369‑4539608                                                                                                                                                   |                                                                                              tctcgTGCAGGTGCACAAAGAGCCGGATCGTGATCCGACCAGTCTATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGTTCGTCAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAgg                                                                                             <  1:8757532/146‑1 (MQ=1)                                           tctaTCCTTGATGTGGTTGCAGGCCAGTGGCCCGCCTGATCGTCAAGTCGTGCTGTTCTATTACACCACCAGCCGCGCTCAGGATGTGCCGCTGCGCCTGCTGGAGGGATATCGCGGTTACGTGATGACCGATTATTACGCCGGTTACa                                                   <  2:690192/146‑1 (MQ=1)                                                         tcaggcgggCCACTGGCCTGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTa                                     >  1:8416493/8‑149 (MQ=0)                                                           aggcgggCCACTGGCCTGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACa                                   >  1:874866/6‑149 (MQ=0)                                                                                            gttcTGTTCGATTACACCACCAGCCGCTCGCAGGAGGTGCCGCTGCGACTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATTATTACGCCGGTTACAACGCGTTGGCGCTACAGACGGGCGTTGAACGACTGGCGTGCATGGCGCa  <  1:5228243/146‑1 (MQ=1)                                                                                                                                                   |                                                                                              TCGCGTGCAGGTGCTCAAAGAGCCGGATCGTGATCCGACCAGTCAATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCA  >  NC_002947/4539369‑4539608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.