Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,544,4010CG27.3% 739.2 / 130.3 388A388G (GCG→GGG) mdfAmultidrug MFS transporter
Reads supporting (aligned to +/- strand):  ref base C (131/151);  new base G (0/106);  total (131/257)
Fisher's exact test for biased strand distribution p-value = 8.65e-24
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 409 total aligned reads displayed.

TACCGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGGCCGCGCCGCTTTG  >  NC_002947/1544253‑1544548
                                                                                                                                                    |                                                                                                                                                   
 aCCGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTCGCTGCATTTTGCCCTGgcggcg                                                                                                                                                    <  2:6673962/149‑1 (MQ=255)
   cGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCggg                                                                                                                                                  >  1:6940840/1‑149 (MQ=255)
    gCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCgggg                                                                                                                                                 <  2:8274601/149‑1 (MQ=255)
    gCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCgggg                                                                                                                                                 >  2:32679/1‑149 (MQ=255)
    gCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCgggg                                                                                                                                                 >  2:6937501/1‑149 (MQ=255)
    gCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCgggg                                                                                                                                                 >  2:10250753/1‑149 (MQ=255)
     cATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCggggg                                                                                                                                                >  2:6263836/1‑149 (MQ=255)
      aTGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCGGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGt                                                                                                                                               >  2:4601123/1‑149 (MQ=255)
       tGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTg                                                                                                                                              >  2:2596438/1‑149 (MQ=255)
         aCGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGc                                                                                                                                            <  2:2412310/149‑1 (MQ=255)
             tGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCgggg                                                                                                                                        >  1:7694571/1‑149 (MQ=255)
                tctcCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCg                                                                                                                                     <  2:4006516/149‑1 (MQ=255)
                 ctcCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGt                                                                                                                                    >  1:5185815/1‑149 (MQ=255)
                   ccAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTg                                                                                                                                  <  2:2767661/149‑1 (MQ=255)
                   ccAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTg                                                                                                                                  >  1:5766900/1‑149 (MQ=255)
                   ccAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTg                                                                                                                                  <  1:4917383/149‑1 (MQ=255)
                     aGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGgc                                                                                                                                >  1:2337873/1‑149 (MQ=255)
                      gCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGgcg                                                                                                                               <  1:9178018/149‑1 (MQ=255)
                      gCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGgcg                                                                                                                               <  1:10437386/149‑1 (MQ=255)
                         aaCAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCTATTATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCtg                                                                                                                            <  1:166475/149‑1 (MQ=255)
                          aCAGAGCATGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCtgt                                                                                                                           <  1:6799764/149‑1 (MQ=255)
                          aCAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCtgt                                                                                                                           <  2:2098930/149‑1 (MQ=255)
                          aCAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATGGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCtgt                                                                                                                           <  1:4831306/149‑1 (MQ=255)
                           cAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCtgtg                                                                                                                          <  1:937681/149‑1 (MQ=255)
                             gagCTAGGGGGTGGTTTCGGCCTTGCTGGGTATGATCACGTTTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGGGTTGTTTGGCGCCGGTGCCTGCTTGCTGCATTTTGCCCTGGCGGGGGGGGTGGCGGGGGCGTTGGCGCTGTGGc                                                                                                                        <  1:8501801/149‑1 (MQ=255)
                             gagCAAGGGGCGGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGc                                                                                                                        <  2:7775243/149‑1 (MQ=255)
                               gCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCg                                                                                                                      >  2:6061310/1‑149 (MQ=255)
                                  aGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCTTTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCtg                                                                                                                   <  1:1640910/149‑1 (MQ=255)
                                    gggCGGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCGGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCtgtg                                                                                                                 <  2:8581466/149‑1 (MQ=255)
                                     ggCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTgg                                                                                                                <  1:7388936/149‑1 (MQ=255)
                                     ggCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTgg                                                                                                                <  2:7502841/149‑1 (MQ=255)
                                        tGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGttt                                                                                                             >  1:2999621/1‑149 (MQ=255)
                                            ttCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTgtgg                                                                                                         >  2:5542835/1‑149 (MQ=255)
                                                gCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTggtggg                                                                                                     <  1:4518041/149‑1 (MQ=255)
                                                  cATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTggtgggtg                                                                                                   <  2:1381957/149‑1 (MQ=255)
                                                     gCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGggc                                                                                                <  1:7181605/149‑1 (MQ=255)
                                                     gCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGggc                                                                                                <  1:1914542/149‑1 (MQ=255)
                                                     gCTGGGGATGATCACGAGTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGggc                                                                                                <  1:10343559/149‑1 (MQ=255)
                                                        ggggATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGggcggc                                                                                             >  2:1946287/1‑149 (MQ=255)
                                                        ggggATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCGGGGGTTTGTGGTGGGTGggcggc                                                                                             >  2:919824/1‑149 (MQ=255)
                                                         gggATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGGGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGcc                                                                                            <  2:4417481/149‑1 (MQ=255)
                                                         gggATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGcc                                                                                            >  1:4362684/1‑149 (MQ=255)
                                                           gatgatCACGTTTGCCTGGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTg                                                                                          <  2:8120185/149‑1 (MQ=255)
                                                            atgatCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTgg                                                                                         >  2:9669742/1‑149 (MQ=255)
                                                            atgatCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTgg                                                                                         >  2:9259285/1‑149 (MQ=255)
                                                               ctCACGCTTGCCTGGGTGGGGTGGGGCGGTGCGCTGCGGGCGCTGTTTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGGGGGGGGGGTGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGa                                                                                      <  1:6075079/148‑1 (MQ=255)
                                                               atCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCTTTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGa                                                                                      <  1:10061085/149‑1 (MQ=255)
                                                                tcaggtgtGCCTGGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCCGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGaa                                                                                     <  2:4161514/142‑1 (MQ=255)
                                                                tCACGCTGGCCTGGCTGGGGTTTGGCGGTGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTGGCCGTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGaa                                                                                     <  1:1325826/149‑1 (MQ=255)
                                                                tCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGTTGATTGGCGCGGGTGCCAGCTTGCTGATTTTTGCCCTGGGGGGGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGaa                                                                                     <  1:3902769/149‑1 (MQ=255)
                                                                tCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGTTTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCGGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGaa                                                                                     <  2:8878674/149‑1 (MQ=255)
                                                                tCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGaa                                                                                     >  2:1630024/1‑149 (MQ=255)
                                                                  aCGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAgg                                                                                   >  2:8019791/1‑149 (MQ=255)
                                                                   cgtttGCCTTGCTGGGGTTTGGCGGAGCGCTGCGGGCGATGTTTGGCGCGGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGTTTTGTGGTGGGTGGGCGGCCTGGGGAAggg                                                                                  <  2:7236732/146‑1 (MQ=255)
                                                                   cGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAggg                                                                                  <  1:1464799/149‑1 (MQ=255)
                                                                    gATTGCCTTGCTGGGGTTTGGGGGTGCGGTGCTGGCTATGTTTGGCGCCGGTGCCCGGTTGCTGCTTTTTGCCCTGGCGGCGGGGGGGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGGGGGCGGCCTGGGGAAgggg                                                                                 <  2:4070146/149‑1 (MQ=255)
                                                                     aTTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGCCGATGATTGGCGCCGGTGCCAGCTTGCTCCATATAGCCCTGGCGGCGGGGGTGGCGGGGGCGATGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGc                                                                                >  2:5697653/1‑149 (MQ=255)
                                                                      ttGCTTTGGTGGGGTTTGGCGGAGCGCTGCTGGGTTTGTTTGGCGCCGGTGCCAGCTTGCTGCTTTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCt                                                                               <  2:1854095/149‑1 (MQ=255)
                                                                      ttGCCTGGCTGGGTTTGGGGGGAGCGCTGCTGGCGTTGTTTGGCGCGGGTGCCTGCTTGCTGCTTTTTGCCGTGGGGGGGGGGGTGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCt                                                                               <  2:5359866/149‑1 (MQ=255)
                                                                       tGCCTTGGTGGGGTTTGGGGGCGCGCTGCGGGCGCGGTTTGGCGCGGGTGCCAGGTTGCTGCATTTTGCCCGGGGGGCGGGGGTGGCGGGGGCGTTGGCGCTGGGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTg                                                                              <  2:3920064/149‑1 (MQ=255)
                                                                       ggCCTTGGGGGGGTTGGGGGGTGGGCTGGGGGCTTTGTTTGGGGCGGGGGCCTGCTTGCTGCTTTTTGCCGTGGGGGGGGGGGGGGGGGGGGGGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTg                                                                              <  1:8278389/148‑1 (MQ=255)
                                                                           ttGCTGGGTTTTGGGGGCGCGCTGGTGGGTATGTTTGGCGCGGGTGCCAGGTTGCTGAATTTGGCCGTGGGGGGGGGGGTGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGTTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGc                                                                          <  2:4829124/149‑1 (MQ=255)
                                                                           ttGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGc                                                                          <  2:9101974/149‑1 (MQ=255)
                                                                           ttGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCAGTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGGTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGc                                                                          >  2:4949800/1‑149 (MQ=255)
                                                                            gggtGGGGTTGGGGGGAGGGCTGGGGGCGATGTTGGGCGCGGGTGCCTGCTTGCTGCATTTGGCCCTGGCGGGGGGGGGGGGGGGGGCGTTGGCGCTGTGGCGGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCt                                                                         <  1:6580733/146‑1 (MQ=255)
                                                                               tGGGTTTGGGCGGCGCGGTGGTGGCGTTGTTGGGCGCGGGTGCCTGCTTGCTGATTTTTGCCCTGGGGGGGGGGGTGGCGGGGGGGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGa                                                                      <  1:3725072/149‑1 (MQ=255)
                                                                                ggggTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGAt                                                                     >  1:1224225/1‑149 (MQ=255)
                                                                                   gTTTGGCGGAGCGCTGCTGGCTTTGATTGGCGCGGGTGCCAGATTGCTGATTTTTGCCCGGGGGGGGGGGGTGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAAt                                                                  <  2:9350560/149‑1 (MQ=255)
                                                                                         cgcaccgccgcTGCCCATGATTGCCGCCGGTCCCACCTTGCTCAATTTTCCCCTGGCGGCGGGGGTGGCGGGGCCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTAt                                                            <  2:2153891/144‑1 (MQ=255)
                                                                                         cGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTAt                                                            >  2:313084/1‑149 (MQ=255)
                                                                                             gcgcTGCTGGCGATGATTGGCGCGGGTGCCCGCTTGCTGCTTTTTGCCGTGGCGGGGGGGGTGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGcc                                                        <  2:115216/149‑1 (MQ=255)
                                                                                             gcgcGGCTGGCGTTGTTTGGCGCCGGTGCCCGCTTGCTGCATTTTGCCCTGGCGGGGGGGGGGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGcc                                                        <  2:990008/149‑1 (MQ=255)
                                                                                                  gctgGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGggc                                                   >  2:9631701/1‑149 (MQ=255)
                                                                                                   ctgGCGATGTTTGGCGCGGGTGCCAGCTTGCTGCATTTTGCCGGGGCGGCGGGGGTGGCGGGGGCGTGGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGggcc                                                  <  1:745461/149‑1 (MQ=255)
                                                                                                    tgGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGggccg                                                 <  1:8717053/149‑1 (MQ=255)
                                                                                                    tgGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGggccg                                                 >  2:7037380/1‑149 (MQ=255)
                                                                                                    tgGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGggccg                                                 >  1:4066471/1‑149 (MQ=255)
                                                                                                         atgatTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCctc                                            >  2:4919636/1‑149 (MQ=255)
                                                                                                           gttgggCGCGGGGGCCAGCTTGCTGCATTTTGCCGGGGCGGCGGGGGGGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCtt                                          <  1:3487340/145‑1 (MQ=255)
                                                                                                              tGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCGGGCGGCGGGGGTGGCGGGGGCGTGGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTcgc                                       <  2:3517023/149‑1 (MQ=255)
                                                                                                              gggCGCGGGTGCCTGCTTGCTGCATTTTGCCCTGGGGGGGGGGGTGGCGGGGGCGTTGGCGCTGTGGCGGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTcgc                                       <  1:6418195/148‑1 (MQ=255)
                                                                                                               ggCGCGGGTGCCTGGTTGGTGATTTTTGCCGGGGGGGGGGGGGGGGGGGGGGGGTGGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGGGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTcgcg                                      <  1:9905257/149‑1 (MQ=255)
                                                                                                               ggCGCCGGTGCCCGCTGGCTGCATTGTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTcgcg                                      <  2:8315887/149‑1 (MQ=255)
                                                                                                               ggCGCCGGTGCAAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGGGTTGGCGCGGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGTCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTcgcg                                      <  2:338950/149‑1 (MQ=255)
                                                                                                                gcgcCGGGGCCCGCTTGCGGCATTGTGCCCTGGCGGGGGGGGTGGCGGGGGCGTTGGCGCTGGGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCgg                                     <  2:5288163/149‑1 (MQ=255)
                                                                                                                 cgcgGGTGCCTGCTTGCTGCATTTTGCCCTGGGGGGGGGGGGGGCGGGGGCGTGGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCggg                                    <  1:8471190/149‑1 (MQ=255)
                                                                                                                 cgcCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGGGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTTTTGCCGGGGCCGGCCTCTTCGCggg                                    <  2:5148278/149‑1 (MQ=255)
                                                                                                                     ggTGCCTGCTTGCTGCATTTTGCCGTGGGGGGGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTaaa                                <  2:5958036/149‑1 (MQ=255)
                                                                                                                     ggTGCCCGCTTGCTGCATTTGGCCCTGGGGGGGGGGGGGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTaaa                                <  1:2207066/149‑1 (MQ=255)
                                                                                                                         cctgCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCg                            <  2:9571455/146‑1 (MQ=255)
                                                                                                                          cAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGGGAAACCGc                           >  1:3260719/1‑149 (MQ=255)
                                                                                                                            ggttGCTGCTTTTGGCCCTGGCGGGGGGGGTGGGGGGGGGGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTc                         <  1:786238/147‑1 (MQ=255)
                                                                                                                               tgctgcATTTTGCCGTGGCGGCGGGGGGGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTa                      <  2:84515/149‑1 (MQ=255)
                                                                                                                               tgctgcATTTGGCCCTGGCGGGGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTa                      <  2:1524078/149‑1 (MQ=255)
                                                                                                                                   gctttttGCCGTGGGGGCGGGGGTGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAcaca                  <  1:9060330/146‑1 (MQ=255)
                                                                                                                                   gcATTTGGCCCTGGGGGGGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAcaca                  <  2:4669777/149‑1 (MQ=255)
                                                                                                                                      ttggccccGGGGGGGGGGGGTGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTGGTGGTGGGTGGGCGGCCGGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACACAggg               <  1:5935237/144‑1 (MQ=38)
                                                                                                                                       tttGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCACTTCGCGGGTAAAACCCCGACGACACAAGgc              >  2:2265866/1‑149 (MQ=255)
                                                                                                                                         ggCCCTGGCGGCGGGGGGGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGgccg            <  2:6449936/148‑1 (MQ=255)
                                                                                                                                           ccgtGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGgccgcg          <  1:2596438/146‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TACCGCATGACGCTGTTCTCCAGCGAACAGAGCAAGGGGCTGGTTTCGGCCATGCTGGGGATGATCACGATTGCCTTGCTGGGGTTTGGCGGAGCGCTGCTGGCGATGATTGGCGCCGGTGCCAGCTTGCTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACACAGGGCCGCGCCGCTTTG  >  NC_002947/1544253‑1544548

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑