| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,580,295 | Δ3,133 bp | IS1‑mediated | [yhhX]–yrhA | [yhhX], ryhB, yhhY, yhhZ, yrhA |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3580295 | 3584133–3583429 | 3135–3839 | 20 [0] | [0] 2 | [yhhX]–[insB1] | [yhhX],ryhB,yhhY,yhhZ,yrhA,insA,[insB1] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3580294 | 0 (0.000) | 20 (1.030) | 15/132 | 0.2 | 100% | coding (512/1038 nt) | yhhX | putative oxidoreductase |
| ? | NC_000913 | 3583428 = | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
ACAGAGAAATAATCTGGTCCATCGTATGCACACCAAGGCCATAAAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3580247‑3580294‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT > NC_000913/3583428‑3583491 ACAGAGAAATAATCTGGTCCATCGTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCAACTTACT > 1:204638/1‑68 AGAGAAATAATCTGGTCCATCGTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCAACTTACTGA < 1:342836/68‑1 AGAGAAATAATCTGGTCCATCGTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCAACTTACTGA < 1:505119/68‑1 GAAATAATCTGGTCCATCGTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCAACTTACTGATTT > 2:276618/1‑68 ATAATCTGGTCCATCGTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCAACTTACTGA > 2:430208/1‑62 ATAATCTGGTCCATCGTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCAACTTACTGA < 1:430208/62‑1 AATCTGGTCCATCGTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGT > 1:699715/1‑68 TCTGGTCCATCGTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCGACTTACCGATTTAGTGTAT > 2:162236/1‑68 TCTGGTCCATCGTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTAT > 2:30390/1‑68 TCTGGTCCATCGTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCAACTTACTGAATTAGTGTAT > 2:370029/1‑68 TCTGGTCCATCGTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCAACTTACAGATTTAGTGTAT > 1:59575/1‑68 CCATCGTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGT > 2:365685/1‑68 ATCGTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCAACTTACAGATTTAGTGTATGATGGTGT < 2:59575/68‑1 TCGTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTT < 1:115642/68‑1 GTATGCACACCAAGGCCATAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTT < 2:343414/68‑1 ACCAAGGCCATAAAACGGGTGAGGCTGCCAACTTACTGATTTAGTGTATGATGGTGGTTTTGAGGTGC > 2:173033/1‑68 GGCCATAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG < 1:717531/68‑1 TAAAACGGGTGATGCCGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCT < 1:642275/68‑1 AAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC > 1:220774/1‑68 AACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT > 1:170522/1‑68 ACAGAGAAATAATCTGGTCCATCGTATGCACACCAAGGCCATAAAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3580247‑3580294‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT > NC_000913/3583428‑3583491 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |