| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 871062 | 16 (0.820) | 4 (0.230) | 3/118 | 1.6 | 20.9% | coding (96/921 nt) | gsiC | glutathione ABC transporter permease |
| ? | NC_000913 | = 871080 | 16 (0.920) | coding (114/921 nt) | gsiC | glutathione ABC transporter permease | |||||
GGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACTGGTGCGTCAG > NC_000913/870998‑871125 | ggTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGAt > 2:483810/1‑68 (MQ=255) tGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCg > 2:583212/1‑68 (MQ=255) gACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCgat < 2:491567/68‑1 (MQ=255) aTCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTgccgg > 2:131685‑M2/1‑63 (MQ=255) cGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTgccgggc > 1:270526‑M2/1‑61 (MQ=255) gTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGcc > 1:245495/1‑68 (MQ=255) ctcGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTgtcgggcagc > 2:292424‑M2/1‑58 (MQ=255) ctcGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTgccgggcagc > 1:37768‑M2/1‑58 (MQ=255) gCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTg > 1:358126/1‑68 (MQ=255) tgtTTTTATTTGTCCATATGCTGCCCTGCGATCCGGCGCGATTGATTgccgggcagcatatggacaaa > 1:516662‑M2/1‑47 (MQ=255) tgtTTTTATTTGTCCATATGCTGCCCGGCaatcaatcgcgccggatcgccgggcagcatatggacaaa > 1:429025‑M1/1‑29 (MQ=255) tttATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAgg < 1:633164/68‑1 (MQ=255) ttATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGt < 1:549204/68‑1 (MQ=255) tATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGATGCTGATGCGCAGGtt < 1:392223/68‑1 (MQ=255) tATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGtt < 1:149467/68‑1 (MQ=255) tATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGtt < 1:164539/68‑1 (MQ=255) tATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGtt < 1:269939/68‑1 (MQ=255) tttGTCCATATGCTGCCCGGCaatcaatcgcgccggatcgcagggcagcatatggacaaataaaaaca > 1:516662‑M1/1‑21 (MQ=255) tttGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTgccgggcagcatatggacaaataaaaaca > 1:429025‑M2/1‑39 (MQ=255) ttGTCCATATGCTGTCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGGtata < 1:18082/68‑1 (MQ=255) gTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGa < 1:217998/68‑1 (MQ=255) atatGCTGCCCGGCGAGCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGGTATAGAACTg < 1:141806/68‑1 (MQ=255) tgctgcCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACTGGTg > 1:22196/1‑68 (MQ=255) gctgcCCGGCaatcaatcgcgccggatcgccgggcagcatatggacaaataaaaacaccagcaccgag > 1:37768‑M1/1‑10 (MQ=255) gctgcCCGACaatcaatcgcgccggatcgccgggcagcatatggacaaataaaaacaccagcaccgag > 2:292424‑M1/1‑10 (MQ=255) gctgcACGGCGATCCGGCGAGATTGATTGCCGGGCCCGAAGCTGATGCGCTGGTTATAGAACTGGTGc > 2:254517/1‑68 (MQ=255) gcCCGGCaatcaatcgcgccggatcgccgggcagcatatggacaaataaaaacaccagcaccgagacg > 1:270526‑M1/1‑7 (MQ=255) ccGGCaatcaatcgcgccggatcgccgggcagcatatggacaaataaaaacaccagcaccgagacgat > 2:131685‑M1/1‑5 (MQ=255) | GGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACTGGTGCGTCAG > NC_000913/870998‑871125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |