New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3578118	57 (2.010)	3 (0.120)	3/116	2.2	7.4%	coding (609/996 nt)	gntR	d‑gluconate inducible gluconate regulon transcriptional repressor
	?	NC_000913	= 3578182	25 (1.010)					coding (545/996 nt)	gntR	d‑gluconate inducible gluconate regulon transcriptional repressor
Rejected: Frequency below/above cutoff threshold.

ACCGGAAGAGTAAGAAGAAGATTGCTCAACCATCACGCTATATGGCACCAGGCCTGCATCCAGCATCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3578049‑3578118 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatcgccACATTGCCTATCTCGGCGCACGTCTCGACGAACGTACTATCATCAAACAGAAGGGATACGAACAGGC  <  NC_000913/3578182‑3578116                                                                                                                                           ACCGGAAGAGTAAGAAGAAGATTGCTCAACCATCACGCTATATGGCACCAGGCCTGCATCCAGCATCG                                                                       >  2:660487/1‑68 ACCGGAAGAGAAAGAAGAAGAATGCACAACCATCACGCTATATGGCACCAGGCCAGCATCCAGCATCG                                                                       >  1:976339/1‑68               AAGAAGCTTGCTCAACCATCACGCTATATGGCACCAGGCCTGCGTCCGGCGTCGCCACGTTGCCTATa                                                         >  2:995284/1‑67                                             GCACCAGGCCTGCATCCAGCATCGCCGCATTGCCTATCTCGGCGCACGTCTAGGCGTCCGTACGATCA                           >  2:684408/1‑68                                               ACCAGGCCTGCATCCAGCATCGCCACATTGCCTATCTCGGCGCACGTCTCGGCGAGCGTACTATCATC                         >  2:291934/1‑68                                                                    GCCACATTGCCTATCTCGGCGCACGTCTCGACGAACGTACTATCATCAAACAGAAGGGATACGAACAG    <  2:347814/68‑1                                                                     CCACATTGCCTATCTCGGCGCACGTCTCGACGAACGTACTATCATCAAACAGAAGGGATACGAACAGG   <  2:194833/68‑1                                                                      CACATTGCCTATCTCGGCGCACGTCTCGACGAACGTACTATCATCAAACAGAAGGGATACGAACAGGC  <  2:156399/68‑1                                                                                                                                           ACCGGAAGAGTAAGAAGAAGATTGCTCAACCATCACGCTATATGGCACCAGGCCTGCATCCAGCATCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3578049‑3578118 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatcgccACATTGCCTATCTCGGCGCACGTCTCGACGAACGTACTATCATCAAACAGAAGGGATACGAACAGGC  <  NC_000913/3578182‑3578116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.