| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4015247 | 13 (0.500) | 3 (0.130) | 3/118 | 2.1 | 18.4% | coding (2195/2262 nt) | metE | 5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase |
| ? | NC_000913 | = 4015259 | 15 (0.650) | coding (2207/2262 nt) | metE | 5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAA > NC_000913/4015186‑4015314 | gCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGgtttct < 1:890044‑M1/68‑7 (MQ=255) gCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACc > 2:554227‑M2/1‑67 (MQ=255) gCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACc < 1:8767‑M2/68‑2 (MQ=255) gCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGc < 1:483026/68‑1 (MQ=255) gCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGc < 2:515590/68‑1 (MQ=255) agagCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCAc > 2:910740/1‑68 (MQ=255) gcgcCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTgg < 2:922455/68‑1 (MQ=255) gcgcCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTgg < 1:642971/68‑1 (MQ=255) cgcCTGTGGGTCAACCCGGACTGTGGCCTGAACACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGc > 1:246202/1‑68 (MQ=255) gggTCACCCCGTCCTGTGGCCTGAAACCGCGCGGCTGGCCATAAACccgcgcgttttcaggccacagt > 1:500801‑M2/1‑46 (MQ=255) gTCAACCCGGACTGTGGCCTGAAAACGCGCGGgtttatggcccgccgcgcgttttaaggccacagtcc > 1:839946‑M1/1‑32 (MQ=255) gTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGt > 1:59811/1‑68 (MQ=255) cccGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAgg > 2:61268/1‑68 (MQ=255) ggACTGTGGCCTTAAAACGCGCGGCGGGCCATAAACccgcgcgttttcaggccacagtccgggttgac > 1:839946‑M2/1‑36 (MQ=255) gACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGTCGAACATGGTGCAggcggc < 1:249271/68‑1 (MQ=255) gACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAggcggc < 1:826714/68‑1 (MQ=255) aCTGTGGCCTGAAAACGCGCGGgtttatggccagccgcgcggtttcaggccacaggacggggtgaccc > 1:500801‑M1/1‑22 (MQ=255) cTGTGGCCTGAAAACGCGCGGCTGGCCAGAACCCCGCGCGGCACTGGCGAACATGGTGCAGGCGgcgc > 2:619988/1‑68 (MQ=255) ggCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGaa > 2:723614/1‑68 (MQ=255) cgcgGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCgggg > 2:242926/1‑68 (MQ=255) ggtttctggccagccgcgcgttttcaggccacagtccgggttgacccacaggcgctctgccggaatgc < 1:8767‑M1/68‑68 (MQ=255) ggtttctggccagccgcgcgttttcaggccacagtccgggttgacccacaggcgctctgccggaatgc > 2:554227‑M1/1‑1 (MQ=255) | GCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAA > NC_000913/4015186‑4015314 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |