| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4522458 = | 31 (1.200) | 4 (0.180) | 3/112 | 2.0 | 13.3% | coding (1637/1968 nt) | yjhG | putative dehydratase |
| ? | NC_000913 | 4522501 = | 26 (1.190) | coding (1594/1968 nt) | yjhG | putative dehydratase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTA > NC_000913/4522391‑4522525 | ttCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGc < 1:549832/68‑1 (MQ=255)ttCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGc < 2:571232/68‑1 (MQ=255) aagaaacctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcacc < 1:738964‑M1/2‑1 (MQ=255) aagaaacctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcacc < 1:543324‑M1/2‑1 (MQ=255) aagaaacctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcacc < 2:715792‑M1/2‑1 (MQ=255) aagaaacctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttagttactcacc < 2:778488‑M1/2‑1 (MQ=255) gaaacctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGa < 2:718965‑M1/4‑1 (MQ=255) taccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGATGCAcg > 2:543327‑M1/59‑68 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgcg > 2:735790/1‑68 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgcg > 2:504463/1‑68 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgcg < 2:391898/68‑1 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCAGGCCCCACATGGCCGATGCAcgcg < 2:556956/68‑1 (MQ=255) ccacGGTGCGTAATTTACCGATTGGGCATACGGACAGCTCTTCTGGCAACACATTGACGATGAAcgcg > 2:738967/4‑68 (MQ=255) gTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGt < 2:360353/68‑1 (MQ=255) gCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAg < 2:550478/68‑1 (MQ=255) cagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGATGCACGCGCCAGTAGaa < 1:775579‑M1/21‑1 (MQ=255) aTTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACg < 1:158444/68‑1 (MQ=255) aTTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACg > 1:449702/1‑68 (MQ=255) aTTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACg < 1:89353/68‑1 (MQ=255) ttACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGcc < 2:755869/68‑1 (MQ=255) aCCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCg > 1:276710/1‑68 (MQ=255) gATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCgagg > 1:686150/1‑67 (MQ=255) ggCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGt < 1:504460/68‑1 (MQ=255) cTCCGGCCAGCGCTTCTGACCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAACCGTGCa > 2:164552/1‑68 (MQ=255) gCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGt < 2:84611/68‑1 (MQ=255) acggtaagcatgtttcgttaatcaCCGATGCCCGCGCCAGTAGAAACGCCCGAGGAACGTGCAGCGGt < 2:843032‑M1/44‑1 (MQ=255) acggtaagcatgtttcgttaatcaCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGt < 2:24245‑M1/44‑1 (MQ=255) ccAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTg > 1:715789/1‑68 (MQ=255) ggtaagcatgtttcgttaatcaCCGATGCACGCGCCAGTAGAAACGCCCGAGAGACGTGCATCGGTGa < 2:914860‑M1/46‑1 (MQ=255) aggcgcTTCTGGCCCCACATTGCCGATTCACGAGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGa < 2:283300/66‑1 (MQ=255) tGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGact > 1:283298/1‑66 (MQ=255) tGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGaaa < 2:852474/68‑1 (MQ=255) gCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACa < 1:879545/68‑1 (MQ=255) ccccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTACCGAAACAt > 2:18071/1‑68 (MQ=255) ccccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACAt > 2:661388/1‑68 (MQ=255) ccccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACAt > 1:776652/1‑68 (MQ=255) ccccACATGGCCGATGCACGCGCCAGTAGAAACGCACGAGAAACGTGCATCGGTGATTAACGAAACAt > 2:393682/1‑68 (MQ=255) acaTGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCtt < 1:136474/68‑1 (MQ=255) tGGCCGATTCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 2:616532/68‑1 (MQ=255) ggCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCg > 1:738067/1‑68 (MQ=255) gCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCGTCGGTGATTAACGAAACATGCTTACCGt > 1:313242/1‑68 (MQ=255) CCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTa < 2:752005‑M1/68‑1 (MQ=255) | TTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTA > NC_000913/4522391‑4522525 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |