| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1458931 = | 14 (0.540) | 3 (0.120) | 3/124 | 2.1 | 17.1% | coding (668/789 nt) | paaG | 1,2‑epoxyphenylacetyl‑CoA isomerase, oxepin‑CoA‑forming |
| ? | NC_000913 | 1458971 = | 16 (0.660) | coding (708/789 nt) | paaG | 1,2‑epoxyphenylacetyl‑CoA isomerase, oxepin‑CoA‑forming | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAGCGCAGATTATCGTGAAGGTGTCAGTGCGTTCCTGGCTA > NC_000913/1458904‑1459023 | aagcGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGa > 2:737599/1‑68 (MQ=255) gataatctgcgctccgtccggcaagtcgctgatagtcacgttccagatccagttgcgtatcgagcgaa > 1:584482‑M2/67‑67 (MQ=255) cGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACtt < 1:439792/68‑1 (MQ=255) aTAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGc < 1:159440/68‑1 (MQ=255) aTAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcgga > 2:768402/1‑68 (MQ=255) aTAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcgga > 2:386525/1‑68 (MQ=255) gcTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAg > 2:916718/1‑68 (MQ=255) aTACGCTCGTTACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAGCGCAGATTAt < 1:794530/68‑1 (MQ=255) ttCGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAGCGCAGATTATc > 1:584482‑M1/3‑68 (MQ=255) aTACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAGCGCAGATTATCGTGAAGgt < 1:404188/68‑1 (MQ=255) acgttccagatccagttgcgtatcgagcgACTTGCCGGACGGAGCGCAGATTATCGTGAAg > 1:270256‑M2/30‑61 (MQ=255) acgttccagatccagttgcgtatcgagcgACTTGCCGGACGGAGCGCAGATTATCGTGAAg < 2:270258‑M2/32‑1 (MQ=255) aaCTGGATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAGCGCAGATTATCGTGAAGGTGTCAGt < 1:205322/68‑1 (MQ=255) aaCTGGATCTGGAACGCGACTATCAGCGACTTGCCGGACGGAGCGCAGATTATCGTGAAGGTGTCAGt < 2:134846/68‑1 (MQ=255) tGGATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAGCGCAGATTATCGTGAAGGTGTCAGTGCg > 2:37198/1‑68 (MQ=255) ggATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAGCGCAGATTATCGTGAAGGTGTCAGTGCGt < 1:883335/68‑1 (MQ=255) gATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAGCGCAGATTATCGTGAAGGTGTCAGTGCGtt < 1:958411/68‑1 (MQ=255) aTCTGGGACGAGACTATCAGCGACTTGCCGGACGGAGCGCAGATTATCGTGAAGGTGTCAGTGCGATc > 1:538666/1‑68 (MQ=255) aaCGTGACTATCAGCGACTTGCCGGACGGAGCGCAGATTATCGTGAAGGTGTCAGTGCGTTCCTGGCt > 2:194675/1‑68 (MQ=255) aCGTGACTATCAGCGACTTGCCGGACGGAGCGCAGATTATCGTGAAGGTGTCAGTGCGTTCCTGGCTa < 1:916714/68‑1 (MQ=255) | AAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAGCGCAGATTATCGTGAAGGTGTCAGTGCGTTCCTGGCTA > NC_000913/1458904‑1459023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |