| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,413,571 | T→C | intergenic (‑106/‑293) | acrS ← / → acrE | acrAB operon transcriptional repressor/cytoplasmic membrane lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,413,571 | 0 | T | C | 100.0% | 68.9 / NA | 19 | intergenic (‑106/‑293) | acrS/acrE | acrAB operon transcriptional repressor/cytoplasmic membrane lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (13/6); total (13/6) | |||||||||||
AATAGCGAAGGTTAATCTATCACCTAATGTGTATTTATACGAGAGGCTAATATTGAGTTGCTATAAATCGTTAAATAAATAATATATATTATTTACCTAAGATACATTCACTACATCAATATATAT > NC_000913/3413510‑3413635 | aaTAGCGAAGGTTAATCTATCACCTAATGTGTATTTATACGAGAGGCTAATATTGAGTTGCCATAAAt > 1:726622/1‑68 (MQ=255) ggTTAATCTATCACCTAATGTGTATTTATACGAGAGGCTAATATTGAGTTGCCATAAATCGTtaaata > 2:696043/1‑68 (MQ=255) gctAATCTATCACCTAATGTGTATTAATACGAGAGGCTAATATTGAGTTGCCATAAATCGTtaaataa < 2:724768/66‑1 (MQ=255) tcaaTCACCTAATGTGTATTTATACGAGAGGCTAATATTGAGTTGCCATAAATCGTTAAATAaataat < 2:382801/65‑1 (MQ=255) cTATCACCTAATGTGTATTTATACGAGAGGCTTATATTGAGATGCCATAAATCGTTAAATAAataata > 1:1848/1‑68 (MQ=255) cTATCACCTAATGTGTATTTATACGAGAGGCTAATATTGAGTTGCCATAAATCGTTAAATAAataata > 1:215185/1‑68 (MQ=255) tATCACCTAATGTGTATTTATACGAGAGGCTAATATTGAGTTGCCATAAATCGTTAAATAaataat < 2:182023/66‑1 (MQ=255) tATCACCTAATGTGTATTTATACGAGAGGCTAATATTGAGTTGCCATAAATCGTTAAATAaataat > 1:182023/1‑66 (MQ=255) tgtgTATTTATACGGGGGGCTAATTTTGAGTTGCCATAAATCGTTAAATAAATAATATATtttattta > 1:7029/1‑68 (MQ=255) tgtgTATTTATACGAGAGGCTAATATTGAGTTGCCATAAATCGTtaaat > 1:70121/1‑49 (MQ=255) tgtgTATTTATACGAGAGGCTAATATTGAGTTGCCATAAATCGTtaaat < 2:70121/49‑1 (MQ=255) tgtATTTATACGAGAGGCTAATATTGAGTTGCCATAAATCGTTAAATAAATAatat > 1:719633/1‑56 (MQ=255) tgtATTTATACGAGAGGCTAATATTGAGTTGCCATAAATCGTTAAATAAATAatat < 2:719633/56‑1 (MQ=255) taCGAGAGGCTAATATTGAGTTGCCATAAATCGTTAAATAAATAATATATATTATTTACCTAAGATaa > 2:189936/1‑67 (MQ=255) taCGAGAGGCTAATATTGAGTTGCCATAAATCGTTAAATAAATAATATATATTATTTACCTAAGATAc > 1:476844/1‑68 (MQ=255) gagGCTAATATTGAGTTGCCATAAATCGTTAAATAAATAAATTATATTATTTACCTAAGATACATTCa < 1:252130/68‑1 (MQ=255) tatTGAGTTGCCATAAATCGTTAAATAAATAATATATATTATTTACCTAAGATACATTCACTACATCa > 2:426537/1‑68 (MQ=255) tGAGTTGCCATAAATCGTTAAATAAATAATATATATTATTTACCTAAGATACATTCACTACATCAata > 2:411677/1‑68 (MQ=255) tGCCATAAATCGTTAAATAAATAATATATATTATTTACCTAAGATACATTCACTACATCAatatatat > 1:157758/1‑68 (MQ=255) | AATAGCGAAGGTTAATCTATCACCTAATGTGTATTTATACGAGAGGCTAATATTGAGTTGCTATAAATCGTTAAATAAATAATATATATTATTTACCTAAGATACATTCACTACATCAATATATAT > NC_000913/3413510‑3413635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |