Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	583338	583347	10	4 [3]	[3] 6	tfaX/appY	pseudogene, DLP12 prophage;Phage or Prophage Related/global transcriptional activator; DLP12 prophage

GAATGTGACTTGATAAGAAATGCAAGTAAAAATGATACTCTTTTTATTTTAAATTCAAACGGTTGACATAT  >  NC_000913/583345‑583415    |                                                                    gAATGTGACTTGATAAGAAATGCAAGTAAAAATGATACTCTTTTTATTTTAAATTCAAACGGTTGACa     <  2:134761/68‑1 (MQ=255) gAATGTGACTTGATAAGAAATGCAAGTAAAAATGATACTCTTTTTATTTTAAATTCAAACGGTTGACa     <  2:171686/68‑1 (MQ=255)  aaTGTGACTTGATAAGAAATGCAAGTAAAAATGATTCTCTTTTTATTTTAATTTCTCTCGGTTGACat    >  2:605834/1‑68 (MQ=255)    tgtgACTTGATAAGAATTGCTAGTAATAATGATACTCTTTTTATTTTAATTTCTAACGGGTGACttat  <  1:605829/68‑1 (MQ=255)    tgtgACTTGATAAGAAATGCAAGTAAAAATGATACTCTTTTTATTTTAAATTCAAACGGTTGACatat  <  2:649923/68‑1 (MQ=255)    tgtgACTTGATAAGAAATGCAAGTAAAAATGATACTCTTTTTATTTTAAATTCAAACGGCTGACatat  <  1:132529/68‑1 (MQ=255)    |                                                                    GAATGTGACTTGATAAGAAATGCAAGTAAAAATGATACTCTTTTTATTTTAAATTCAAACGGTTGACATAT  >  NC_000913/583345‑583415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑