Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,197,502	C→T	G11R (GGA→AGA)	ymfD ←	e14 prophage; putative SAM‑dependent methyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,197,502	0	C	T	100.0%	37.1 / NA	13	G11R (GGA→AGA)	ymfD	e14 prophage; putative SAM‑dependent methyltransferase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (3/10);  total (3/10)

CTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTACCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTT  >  NC_000913/1197437‑1197565                                                                  |                                                                cTCGCAAAGATTTCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGt                                                               <  1:1044945/68‑1 (MQ=255) cTCGCAAAGATATCTAGAGTGCTTCGTATGAGGCTTTGCTGCATTCTCTGAGCGAATATTTACTCTGt                                                               <  2:177702/68‑1 (MQ=255)   ctcAAAGATATCTATAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGTGc                                                             <  2:275163/66‑1 (MQ=255)   cGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGTGc                                                             <  2:857360/68‑1 (MQ=255)        aGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGTGCAtatt                                                        <  1:239217/68‑1 (MQ=255)                  agGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGt                                                               >  1:717656/1‑51 (MQ=255)                  agGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGt                                                               <  2:717662/51‑1 (MQ=255)                    ggCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGTGCATATTATAGTTCAAAGc                                            <  2:722/68‑1 (MQ=255)                               aGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGTGCAtatt                                                        <  1:324890/45‑1 (MQ=255)                               aGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGTGCAtatt                                                        >  2:324893/1‑45 (MQ=255)                                ggTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGTGCATATTATAGTTCAAAGCAAGTACCATTCa                                <  2:602127/68‑1 (MQ=255)                                      gctgcATTCTCTGAGCGAATATTAACTCTGTGCATATTATAGTTCAAAGCAAGTACCATTCAATTAAt                          <  1:936804/68‑1 (MQ=255)                                                              aCTCTGTGCATATTATAGTTCAAAGCAAGTACCATTCAATTAATGTTATTTTTAGTGAAAAATTCttt  >  1:611511/1‑68 (MQ=255)                                                                  |                                                                CTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTACCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTT  >  NC_000913/1197437‑1197565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑