New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2698122	40 (1.130)	6 (0.190)	3/118	2.8	15.1%	coding (429/636 nt)	pgpC	phosphatidylglycerophosphatase C, membrane bound
	?	NC_000913	= 2698142	31 (0.960)					coding (409/636 nt)	pgpC	phosphatidylglycerophosphatase C, membrane bound
Rejected: Frequency below/above cutoff threshold.

TGTGCGACCTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2698051‑2698122 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgCCGCGGGTTAATCTTATCGCCAGCCAAATTCAGCGTGGCTATGGTGGTTGGGTATTGACGATGCGTT  <  NC_000913/2698142‑2698076                                                                                                                                             TGTGCGACCTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTG                                                                         >  2:1249906/1‑68   TGCGACCTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGC                                                                       >  1:1154517/1‑68   TGCGACCTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGC                                                                       >  1:217360/1‑68                           ACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGCCGCGGGTTAATCTTATCGCCA                                               >  1:854784/1‑68                                         CCCAACCACCATAGCCACGCTGAATTTGGCTGCCGCGGGTTAATCTTTTCGCCAGCCAAATTCAGCGT                                 >  1:1028175/1‑68                                         CCCAACCACCATAGCCACGCTGAATTTGGCTGCCGCGGGTTAATCTTATCGCCAGCCAAATTCAGCGg                                 >  2:1252359/1‑67                                         CCCAAACACCATAGCCACGCTGAATTTGGAAGACGCGGGTTAATCTTATAGCCAGCCAAATTCAGagg                                 >  1:729364/1‑65                                                       CCACGCTGAATTTGGCTGCCGCGGGTTAATCTTATCGCCAGCCAAATTCAGCGTGGCTATGGTGGTTG                   >  1:1249907/1‑68                                                       CCACGCTGAATTTGGCTGCCGCGGGTTAATCTTATCGCCAGCCAAATTCAGCGTGGCTATGGTGGTTG                   >  2:217360/1‑68                                                                      CTGCCGCGGGTTAATCTTATCGCCAGCCAAATTCAGCGTGGCTATGGTGGTTGGGTATTGACGCTGCG    >  2:1221725/1‑68                                                                      CTGCCGCGGGTTAATCTTATCGCCAGCCAAATTCAGCGTGGCTATGGTGGTTGGGTATTGACGATGCG    >  1:911356/1‑68                                                                      CTGCCGCGGGTTAATCTTATCGCCAGCCAAATTCAGCGTGGCTATGGTGGTTGGGTATTGACGATGCG    >  2:1038944/1‑68                                                                        GCCGCGGGTTAATCTTATCGCCAGCCAAATTCAGCGTGGCTATGGTGGTTGGGTATTGACGATGCGgt  <  2:855160/68‑3                                                                                                                                             TGTGCGACCTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2698051‑2698122 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgCCGCGGGTTAATCTTATCGCCAGCCAAATTCAGCGTGGCTATGGTGGTTGGGTATTGACGATGCGTT  <  NC_000913/2698142‑2698076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.