Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	583487	583574	88	6 [4]	[2] 6	tfaX/appY	pseudogene, DLP12 prophage;Phage or Prophage Related/global transcriptional activator; DLP12 prophage

TCTTAAATGAAATTTATTAAAATTTGCAAACTATAATTTTGTGTATAAAAATATAAATGCACATCATCCTGATTATGATTGTGTATTTAATTGGTTGTT  >  NC_000913/583538‑583636                                      |                                                              tCTTAAATGAAATTTATTAAAATTTGCAAACTATAATTTTGTGTTTAATTATATAATTGCACatcttc                                 <  1:897265/68‑1 (MQ=37)          aaaTTTATTAAAATTTGCAAACTATAATTTTGTGTATAAAAATATAAATGCACATCATCCTGATTATg                        <  2:973417/68‑1 (MQ=255)                                      tttGTGTATAAAAATATAAATGCACATCATCCTGa                             >  1:1121635/1‑35 (MQ=255)                                      tttGTGTATAAAAATATAAATGCACATCATCCTGa                             <  2:1121634/35‑1 (MQ=255)                                      tttGTGTATAAAAATATAAATGCACATCATCCTGATTATGATTGTGTATTTAATTGgttgtt  <  1:449365/62‑1 (MQ=255)                                      tttGTGTATAAAAATATAAATGCACATCATCCTGATTATGATTGTGTATTTAATTGgttgtt  >  2:449363/1‑62 (MQ=255)                                      |                                                              TCTTAAATGAAATTTATTAAAATTTGCAAACTATAATTTTGTGTATAAAAATATAAATGCACATCATCCTGATTATGATTGTGTATTTAATTGGTTGTT  >  NC_000913/583538‑583636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑