| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 355486 | 17 (0.920) | 3 (0.180) | 3/118 | 1.6 | 21.3% | coding (565/1260 nt) | codB | cytosine transporter |
| ? | NC_000913 | = 355537 | 7 (0.420) | coding (616/1260 nt) | codB | cytosine transporter | |||||
CGGCATGGGCGGCCTGGACGCATTAAAAGCGGTCGTTCCCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/355443‑355486‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcacTGATAAATGACCCCACAACCAGCGCCAGCGCGACATTGAAATCTAACGGTTGTGCGGGAACG < NC_000913/355537‑355476 CGGCATGGGCGGCCTGGACGCATTAAAAGCGGTCGTTCCCGCACTGATAAATGACCCCACAACCAGCG > 2:255549/1‑68 GCATTAAAAGCGGTCGTTCCCGCACTGATAAATGACCCCACAACCAGCGCCAGCGCGACATTGAAATC < 1:255550/68‑1 AAAAGCGGTCGTTCCCGCACTGATAAATGACCCCACAACCAGCGCCAGCGCGACATTGAAATCTAACG < 1:277210/68‑1 CCGCACTGATAAATGACCCCACAACCAGCGCCAGCGCGACATTGAAATCTAACGGTTGTGCGGGAACG < 2:537638/68‑1 CGCACTGATAAATGACCCCACAACCAGCGCCAGCGCGACATTGAAATC < 1:459952/48‑1 CGCACTGATAAATGACCCCACAACCAGCGCCAGCGCGACATTGAAATC > 2:459950/1‑48 CGGCATGGGCGGCCTGGACGCATTAAAAGCGGTCGTTCCCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/355443‑355486‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcacTGATAAATGACCCCACAACCAGCGCCAGCGCGACATTGAAATCTAACGGTTGTGCGGGAACG < NC_000913/355537‑355476 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |