New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 182665613 (0.700)3 (0.180) 3/120 1.6 13.1% coding (268/969 nt) astE succinylglutamate desuccinylase
?NC_000913 = 1826936 28 (1.660)coding (1324/1344 nt) astB succinylarginine dihydrolase
Rejected: Frequency below/above cutoff threshold.

GCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGC  >  NC_000913/1826593‑1826721
                                                               |                                                                 
gCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCagga                                                               <  1:509817/68‑1 (MQ=255)
            cAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCgagggagggggctatg                                                   >  1:529811‑M1/1‑52 (MQ=255)
             aaaCATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGa                                                  <  1:122750/68‑1 (MQ=255)
             aaaCATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGa                                                  <  2:82234/68‑1 (MQ=255)
               aCATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATc                                                <  1:332296/68‑1 (MQ=255)
                             tCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCa                                  >  1:465405/1‑68 (MQ=255)
                                cTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACg                               <  2:625787/68‑1 (MQ=255)
                                      cAATAACGTTTCCCTTGCTTCAGCGCgagggagggggcaatggataattttcttgctctgaccttaac                         >  2:406696‑M1/1‑26 (MQ=255)
                                      cAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCGCCAGCAACCGCCAACGTAACgg                         >  1:204145/1‑68 (MQ=255)
                                          aaCGTTTCCCTTGCTTCAGCGCgagggagggggcaatggataattttcttgctctgaccttaacgggt                     <  1:406698‑M1/68‑47 (MQ=255)
                                            cGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGAtctc                   >  1:310843/1‑68 (MQ=255)
                                             gTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGAATCACAAGCAACAGCCAACGTAACGGGAACTCg                  >  2:63721/1‑68 (MQ=255)
                                               ttCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGcc                <  1:433949/68‑1 (MQ=255)
                                                 cccTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGt              <  2:576784/68‑1 (MQ=255)
                                                      gCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGat         <  2:465403/68‑1 (MQ=255)
                                                             cgcAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCgcgc  >  1:406823/1‑68 (MQ=255)
                                                               |                                                                 
GCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGC  >  NC_000913/1826593‑1826721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.