| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 291401 | NA (NA) | 33 (1.780) | 19/132 | 0.1 | 62.3% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 807574 | 20 (1.080) | coding (336/477 nt) | ybhB | kinase inhibitor homolog, UPF0098 family | |||||
ATCGACATCAATACGTTCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTTCGCCTTTCGGCGGTGCTGCGCCATCGTACCCGGTTTTACCAAAGTCGGTACGCGTCTGCA > NC_000913/807517‑807635 | aTCGACATCAATACGTTCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTTCGCCTTTcg < 1:499091/68‑1 (MQ=255) cGACGTCAATACGTTCTATATCCAGCGCGTGAACGGTAAGAATGTAGCGATGAGTTTCGCCTTTcggc > 2:293549/1‑68 (MQ=255) cGACATCAATACGTTCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgcc > 1:319562‑M2/1‑56 (MQ=255) cGACATCAATACGTTCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTTCGCCTTTcggc > 1:235680/1‑68 (MQ=255) cATCAATACGTTCTATATCCAGCGCGTGAACGGTAAATATGTAGCGATGAGTTTCGCCTTTCGGCGGt < 2:380574/68‑1 (MQ=255) cATCAATACGTTCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaac > 2:83149‑M2/1‑53 (MQ=255) cATCAATACGTTCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaac > 1:48880‑M2/1‑53 (MQ=255) tCAATACGTTCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaactt > 2:227529‑M2/1‑51 (MQ=255) cAATACGTTCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaactta > 2:598295‑M2/1‑50 (MQ=255) cAATACGTTCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaactta > 1:543625‑M2/1‑50 (MQ=255) tACGTTCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactg < 1:676497‑M2/68‑22 (MQ=255) aCGTTCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTTCGCCTTTCGGCGGTGCTgcgc > 2:340211/1‑68 (MQ=255) gTTCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTTCGCCTTTCGGCGGTGCTGCGCCa < 2:315414/68‑1 (MQ=255) ttCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTTCGcc > 2:268866/1‑48 (MQ=255) ttCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTTCGcc < 1:268867/48‑1 (MQ=255) ttCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTTCGCCTTTCGGCGGTGCTGCGCCAt > 1:582866/1‑68 (MQ=255) tataTCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagt > 1:74520‑M2/1‑40 (MQ=255) tataTCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagt > 2:258104‑M2/1‑40 (MQ=255) gtcCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgta < 2:349899‑M2/67‑32 (MQ=255) atCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgta < 2:392704‑M2/68‑32 (MQ=255) atCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgta < 2:415126‑M2/68‑32 (MQ=255) atCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgta < 2:566010‑M2/68‑32 (MQ=255) tCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgtat < 1:671515‑M2/68‑33 (MQ=255) tCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTTCGCCTTTCGGCGGTGCTGCGCCATCGTAccc > 2:475996/1‑68 (MQ=255) tCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTTCGCCTTTCGGCGGTGCTGCGCCATCGTAccc > 2:203562/1‑68 (MQ=255) tCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTTCGCCTTTCGGCGGTGCTGCGCCATCGTAccc > 1:138773/1‑68 (MQ=255) tCCAGAGCGTGAGCGGAAAGAATGAAGCGATGAGTTTCGCATTTCGGCGGTGCTGCGCCATCGTAccc > 2:312354/1‑68 (MQ=255) ccAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgtatg < 2:141031‑M2/68‑34 (MQ=255) ccAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgtatg > 1:172417‑M2/1‑35 (MQ=255) ccAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactaatttagtgtatg < 1:495843‑M2/68‑34 (MQ=255) ccAGCGAGTGAACGCTAAAAATGTAGCGATGAGATTCGCCTTTCGGCGGTGCTGCGCCATCGAACCCg > 2:86255/1‑68 (MQ=255) cAGCGCGTGAACTGTAAAAATGTAGCGATGAGTTTCGCCTTTCGGCGGTGCTGCGCCATCGTACCTgg < 1:179748/68‑1 (MQ=255) cAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgt < 2:63689‑M2/64‑31 (MQ=255) cAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgt > 1:63689‑M2/1‑34 (MQ=255) cAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgt < 2:62828‑M2/64‑31 (MQ=255) cAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgt > 1:62828‑M2/1‑34 (MQ=255) cAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTTCGCCTTTCGGCGGTGCTGCGCCATCGTACCCgg > 2:157847/1‑68 (MQ=255) aGCGCGTGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgtatgat > 2:679580‑M2/1‑33 (MQ=255) gcgTGAACGGTAAAAATGTAGCGATGAGTTTCGCCTTTCGGCGGTGCTGCGCCATCGTACCCGGtttt > 2:344842/1‑68 (MQ=255) cgTGAACGGTAAAAATGTAGCGATGAGTTTCGCCTTTCGGCGGTGCTGCGCCATCGTACCCGGTTTTa < 1:345398/68‑1 (MQ=255) tGAACGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:325569‑M2/1‑27 (MQ=255) aCGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgtatgatggtgttttt < 1:235606‑M2/68‑45 (MQ=255) aCGGTAAAAATGTAGCGATGAGTTggtgatgctgccaacttactgagttagtgtatgatggtgttttt < 2:442300‑M2/68‑45 (MQ=255) attgtAGCGATGAGGTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct > 2:232140‑M2/3‑16 (MQ=255) aaTGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct > 1:670343‑M2/1‑16 (MQ=255) aaTGTAGCGATGAGTTTCGCCTTTCGGCGGTGCTGCGCCATCGTACCCGGTTTTACCAAAGTCGGTAc > 1:551579/1‑68 (MQ=255) tGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcc < 2:414299‑M2/68‑55 (MQ=255) tGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcc < 1:202129‑M2/68‑55 (MQ=255) tGTAGCGATGAGTTggtgatgctgccaacttactgatttagtgtatgatggagtttttgaggtgctca < 1:427555‑M2/68‑55 (MQ=255) gTAGCGATGAGTTTCGCCTTTCGGCGGTGCTGCGCCATCGTACCCGGTTTTACCAAAGTCGGTAcgcg < 1:541684/68‑1 (MQ=255) gCGATGAGTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtg > 1:633734‑M2/1‑10 (MQ=255) aTGAGTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggcgctccagtggct > 2:571884‑M2/1‑7 (MQ=255) aTGAGTTggggatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct > 2:347143‑M2/1‑7 (MQ=255) | ATCGACATCAATACGTTCTATATCCAGCGCGTGAACGGTAAAAATGTAGCGATGAGTTTCGCCTTTCGGCGGTGCTGCGCCATCGTACCCGGTTTTACCAAAGTCGGTACGCGTCTGCA > NC_000913/807517‑807635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |