Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,810,5331.G30.8% 12.0 / 16.6 13coding (323/591 nt)ydjMinner membrane protein regulated by LexA
Reads supporting (aligned to +/- strand):  ref base . (4/5);  new base G (2/2);  total (6/7)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.53e-02
Rejected as consensus: Frequency below/above cutoff threshold.

TTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTG  >  NC_000913/1810472‑1810593
                                                              |                                                            
ttttACCTTATGGTTCCGGATGGCTGGTTCATTCCGGCTGATGCTCTACAAGTAATGTTGCTGGGTTa                                                        <  1:337938/68‑1 (MQ=255)
ttttACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTa                                                        <  1:337936/68‑1 (MQ=255)
           ggTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCcaca                                             <  1:240517/68‑1 (MQ=255)
                         ggTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATg                               <  2:362183/68‑1 (MQ=255)
                                 ccGGCTGATGCGCTACAAGGAATGGTGCTGGGGTTATTTGAGCCACATACTTGCCGa                                   <  1:355161/57‑1 (MQ=255)
                                 ccGGCTGATGCGCTACAAGGAATGGTGCTGGGGTTATTTGAGCCACATACTTGCCGa                                   <  1:356072/57‑1 (MQ=255)
                                 ccGGCTGATGCGCTACAAGGAATGGTGCTGGGGTTATTTGAGCCACATACTTGCCGa                                   >  2:355159/1‑57 (MQ=255)
                                 ccGGCTGATGCGCTACAAGGAATGGTGCTGGGGTTATTTGAGCCACATACTTGCCGa                                   >  2:356070/1‑57 (MQ=255)
                                    gCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGCCACccgc                    >  2:661781/1‑68 (MQ=255)
                                           cgcTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGtt             <  2:659070/68‑1 (MQ=255)
                                                    gAATGGTGCTGGGTTATTTGAGCCACATACTTGCAGATATGCTGACACCCGCCGGTGTTCCCCTGctc    >  1:554885/1‑68 (MQ=255)
                                                      aaggTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGCCGCCCGCCGGTGTTACCCAGCTCTg  >  1:464112/3‑68 (MQ=255)
                                                      aTGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTg  >  1:574924/1‑68 (MQ=255)
                                                              |                                                            
TTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTG  >  NC_000913/1810472‑1810593

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: