| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 580753 = | 5 (0.220) | 3 (0.180) | 3/100 | 1.6 | 47.0% | intergenic (‑308/‑81) | ylcI/nohD | DUF3950 family protein, DLP12 prophage/DLP12 prophage; DNA packaging protein |
| ? | NC_000913 | 580810 = | 3 (0.180) | intergenic (‑365/‑24) | ylcI/nohD | DUF3950 family protein, DLP12 prophage/DLP12 prophage; DNA packaging protein | |||||
CGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTT > NC_000913/580716‑580807 | tgttgacttccattgcacattccacggacaaaaacagAGAAAGGAAACGACAGGTGCTGAAAGCGAGc > 2:810210‑M1/38‑68 (MQ=255) gacttccattgcacattccacggacaaaaacagAGAAAGGAAACGACAGGTGCTGAAAGCGAGCtttt > 1:237389‑M1/34‑68 (MQ=255) ttccattgcacattccacggacaaaaacagAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTgg > 1:360319‑M1/31‑68 (MQ=255) gTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCctc > 2:683348/1‑68 (MQ=255) aatttatttAAAATACCACCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCctct > 2:791224/2‑68 (MQ=255) tttaAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGtt > 2:541898/1‑68 (MQ=40) tttaAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTATTAGGCCTCTGTCGtt > 1:634106/1‑68 (MQ=255) aTACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCtgt > 1:410186/1‑66 (MQ=255) | CGTAACTTAATGTATTTATTTAAAATACCCCCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTT > NC_000913/580716‑580807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |