| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,114,456 | G→A | T6I (ACA→ATA) | fpr ← | ferredoxin‑NADP reductase; flavodoxin reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,114,456 | 0 | G | A | 100.0% | 42.2 / NA | 17 | T6I (ACA→ATA) | fpr | ferredoxin‑NADP reductase; flavodoxin reductase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (13/4); total (13/4) | |||||||||||
GGGGCGTGAACGGTGAGACTAAACAGGGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACA > NC_000913/4114393‑4114520 | ggggCGTGAACGGTGAGACTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTATTAc < 2:642466/68‑1 (MQ=255) aCGGTGAGACTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTATTACCCAATCatc < 2:272702/68‑3 (MQ=255) gaCTAAACAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTATTACCCAATCAGCCATGttt > 2:406008/1‑68 (MQ=255) aaCAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTATTACCCAATCAGCCATGTTTTtctc > 2:623879/1‑68 (MQ=255) aaCAGAGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTATTACCCAATCAGCCATGTTTTtctc > 2:623167/1‑68 (MQ=255) gCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTATTACCCAATCAGCCATGTTTTTCTCCTGttt > 2:701934/1‑68 (MQ=255) gTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTATTACCCGATCAGCCATGTTTTTCTCCTGTTttg > 2:404858/1‑68 (MQ=255) ccAGTTCTGCACTTTAGTGACTTTGCCTATTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGAc > 1:618092/1‑68 (MQ=255) gTTCTGCACTTTAGTGACTTTGCCTATTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTg < 1:623877/68‑1 (MQ=255) gTTCTGCACTTTAGTGACTTTGCCTATTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTg < 1:623165/68‑1 (MQ=255) tCTGCACTTTAGTGACTTTGCCTATTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGcc > 1:181675/1‑68 (MQ=255) tCTGCACTTTAGTGACTTTGCCTATTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGcc > 2:643332/1‑68 (MQ=255) aCTTTAGTGACTTTGCCTATTACCAAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATc > 2:347464/1‑68 (MQ=255) aCTGTAGTGCCTGTGCCTATTACCCAAGCAGCCATGTGTTTCTCCTGTTTTGGTTGCCTTGCCTTATc > 1:432551/1‑68 (MQ=255) gACTTTGCCTATTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTtct > 2:592875/1‑68 (MQ=255) gACTATGCCTATTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTtct > 2:559257/1‑68 (MQ=255) ccTATTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACa > 1:69145/1‑68 (MQ=255) | GGGGCGTGAACGGTGAGACTAAACAGGGCGTCGGTCCAGTTCTGCACTTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACA > NC_000913/4114393‑4114520 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |