Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,197,502	C→T	G11R (GGA→AGA)	ymfD ←	e14 prophage; putative SAM‑dependent methyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,197,502	0	C	T	100.0%	18.1 / NA	8	G11R (GGA→AGA)	ymfD	e14 prophage; putative SAM‑dependent methyltransferase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (1/7);  total (1/7)

CTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTACCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTT  >  NC_000913/1197437‑1197566                                                                  |                                                                 cTCGCAAAGATATCTAGAGGGCTTCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGt                                                                <  1:115497/68‑1 (MQ=255) cTCGCAAAGATATCAAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGt                                                                <  2:678947/68‑1 (MQ=255)   cGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGTGc                                                              <  2:371047/68‑1 (MQ=255)     cAAAGATATCTAGAGGGCATCGTATGAGGGTTTGCTGCATTCTCTGAGCGAATATTAACTCTGTGCat                                                            <  2:663623/68‑1 (MQ=255)                   gggCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGTGCATATTATAGTTCAAAg                                              <  1:384332/68‑1 (MQ=255)                   gggCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGTGCATATTATAGTTCAAAg                                              <  1:51039/68‑1 (MQ=255)                                 gTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGTGc                                                              >  1:431735/1‑38 (MQ=255)                                 gTTTTGCTGCATTCTCTGAGCGAATATTAACTCTGTGc                                                              <  2:431735/38‑1 (MQ=255)                                                               ctctGTGCATATTATAGTTCAAAGCAAGTACCATTCAATTAATGTTATTTTTAGTGAAAAATTCtttt  >  2:127963/1‑68 (MQ=255)                                                                  |                                                                 CTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTACCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTT  >  NC_000913/1197437‑1197566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑