| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2803441 = | 57 (1.470) | 14 (0.430) | 4/110 | 2.9 | 23.9% | coding (2094/2145 nt) | nrdE | ribonucleoside‑diphosphate reductase 2, alpha subunit |
| ? | NC_000913 | 2803529 = | 41 (1.250) | coding (28/960 nt) | nrdF | ribonucleoside‑diphosphate reductase 2, beta subunit, ferritin‑like protein | |||||
CGTGAGAGTTTCATAGATATTCCTTAAAGTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2803515‑2803441‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccatcAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCA > NC_000913/2803529‑2803586 CGTGAGAGTTTCATAGATATTCCTTAAAGTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAG > 2:957548/1‑68 GTGAGAGTTTCATAGATATTCCTTAAAGTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGC < 2:117536/68‑1 GAGAGTTTCATAGATATTCCTTAAAGTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGC > 1:401689/1‑68 GAGAGTTTCATAGATATTCCTTAAAGTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGC > 2:165498/1‑68 AGAGTTTCATAGATATTCCTTAAAGTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCC > 2:38884/1‑68 AGAGTTTCATAGATATTCCTTAAAGTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCC > 2:276909/1‑68 ATATTCCTTAAAGTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCATC < 2:1147865/59‑1 ATATTCCTTAAAGTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCATC > 1:1147869/1‑59 cTGCACAGGAGACGCAGCCTTCAATATCAGTACCTTCCAGCGCCATCAACTGGAACAAGATATCTGAC > 2:755256/2‑68 GTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCGTCAACTGGAACAAGATATCTGAC > 2:33712/1‑68 GTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCATCAACTGGAACAAGATATCTGAC > 1:1280360/1‑68 GTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCATCAACTGGAACAAGATATCTGAC > 1:1456331/1‑68 GTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCATCAACTGGAACAAGATATCTGAC > 2:61555/1‑68 GTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCATCAACTGGAACAAGATATCTGAC > 2:541582/1‑68 GTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCATCAACTGGAACAAGATATCTGAC > 2:533236/1‑68 GTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCATCAACTGGAACAAGATATCTGAC > 2:245112/1‑68 GTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCATCAACTGGAACAAGATATCTGAC > 1:821299/1‑68 GTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCATCAACTGGAACAAGATATCTGAC > 1:526982/1‑68 GTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCATCAACTGGAACAAGATATCTGAC > 1:478622/1‑68 cGCACAGTAGACTCAGCCTCCAATTTCATTCCCCTCCAGCGCCATCAACTGGAACAAGATATCTGACG < 1:304562/67‑1 AGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGAT < 1:245114/68‑1 TTCAATTTCAGTGCCTTCCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGT < 2:526979/68‑1 CAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCA > 2:1162206/1‑68 CGTGAGAGTTTCATAGATATTCCTTAAAGTGCACAGGAGACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2803515‑2803441‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccatcAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCA > NC_000913/2803529‑2803586 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |