| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1757085 | 0 (0.000) | 76 (1.960) | 28/130 | 0.1 | 100% | coding (1388/1413 nt) | pykF | pyruvate kinase I |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
GGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGAT > NC_000913/1757023‑1757152 | ggCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaag > 2:1130419‑M1/1‑63 (MQ=255) gCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaagg < 1:301123‑M1/68‑7 (MQ=255) cacacaAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggt > 2:999512‑M1/1‑61 (MQ=255) acaAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcg > 2:106081‑M1/1‑58 (MQ=255) aaaGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaa > 1:41175‑M1/1‑56 (MQ=255) aGGTGACGGTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaaca < 2:1248392‑M1/68‑15 (MQ=255) gTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaag < 2:1158623‑M1/68‑17 (MQ=255) gTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaag > 2:135861‑M1/1‑52 (MQ=255) tGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagt < 1:1234635‑M1/68‑18 (MQ=255) tGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagt < 1:127908‑M1/68‑18 (MQ=255) gACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtc < 1:840909‑M1/68‑19 (MQ=255) cGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccc < 1:999517‑M1/68‑21 (MQ=255) tGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctga < 1:578961‑M1/68‑24 (MQ=255) tGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctga < 1:135863‑M1/68‑24 (MQ=255) gTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgat < 2:1268494‑M1/68‑25 (MQ=255) aGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgctaacaagtccctgatat > 1:478651‑M1/1‑42 (MQ=255) aGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatat > 2:1065889‑M1/1‑42 (MQ=255) aGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctga < 2:1123872‑M1/65‑24 (MQ=255) aGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctga > 1:1123876‑M1/1‑42 (MQ=255) gtaTGGTTTCTTGTGCACTGGTTCCGAGCGGCACTACTAAggatggtgcgaacaagtccctgatatga < 2:495619‑M1/67‑29 (MQ=255) tATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgag < 1:1387487‑M1/68‑30 (MQ=255) tATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgag > 1:1132034‑M1/1‑39 (MQ=255) tATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctga < 2:586643‑M1/62‑24 (MQ=255) tATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctga > 1:586647‑M1/1‑39 (MQ=255) tttCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgaga < 2:1174779‑M1/64‑31 (MQ=255) tttCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgaga > 1:1174783‑M1/1‑34 (MQ=255) gTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt > 1:1086751‑M1/1‑28 (MQ=255) gTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt > 1:262903‑M1/1‑28 (MQ=255) aCTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc > 2:1064786‑M1/1‑24 (MQ=255) ccGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc < 2:1207850‑M1/68‑52 (MQ=255) ccGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc < 2:454770‑M1/68‑52 (MQ=255) cGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgt < 1:736481‑M1/52‑37 (MQ=255) cGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgt > 2:736477‑M1/1‑16 (MQ=255) aGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata > 1:104875‑M1/1‑14 (MQ=255) gCGGCACTACTAAggaaggtgcgaacaagtcactgaaatgagatcatgtatgtcatctggagccatag > 2:1117982‑M1/1‑13 (MQ=255) cGGCACTACTAAggaagttgcgaacaagtccctgatatgagatcatgtttgtcatctgtagccataga < 1:797370‑M1/68‑57 (MQ=255) cGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga < 2:2395‑M1/68‑57 (MQ=255) cGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga < 2:421614‑M1/68‑57 (MQ=255) ctactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg < 2:262901‑M1/68‑62 (MQ=255) ctactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg < 2:1151271‑M1/68‑62 (MQ=255) ctactaAggaaggcgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg < 1:935178‑M1/68‑62 (MQ=255) tactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 2:1133185‑M1/68‑63 (MQ=255) tactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 1:1126218‑M1/68‑63 (MQ=255) actaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt < 2:335360‑M1/68‑64 (MQ=255) actaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt < 2:1325186‑M1/68‑64 (MQ=255) actaAggaaggtgcgaacaagtccctgatatgagatcatggttgtcatctggagccatagaacagggt < 2:1323470‑M1/68‑64 (MQ=255) actaAggaaggtgcgaacaagtcactgatatgagatcatgtttgtcatctggagccatagaacagggt > 2:220665‑M1/1‑5 (MQ=255) ctaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt < 1:435035‑M1/68‑65 (MQ=255) ctaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt < 2:195720‑M1/68‑65 (MQ=255) ctaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt > 1:296199‑M1/1‑4 (MQ=255) ctaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt > 2:473390‑M1/1‑4 (MQ=255) ctaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt > 1:951619‑M1/1‑4 (MQ=255) taAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 2:939263‑M1/65‑63 (MQ=255) taAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 1:939268‑M1/1‑3 (MQ=255) aaggatgttgctaacaagtccctgatatgagatcatgtttgtcatctggagccattgaactgggttca < 2:1170214‑M1/68‑67 (MQ=255) aaggaagttgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 2:379773‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 1:230063‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 1:106261‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 1:1418236‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 1:1079599‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 2:753775‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 2:969446‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 2:404207‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 2:31820‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 2:262639‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 2:1322984‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 2:1308821‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 2:1261600‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 1:554339‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 1:677132‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 1:783295‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 1:911298‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttggcatctggagccatagaacagggttca < 2:979068‑M1/68‑67 (MQ=255) aaggaaggtgcgaacaagtccctgatacgagatcatgtttgtcatctggagccatagaacagtgttca < 2:1369701‑M1/68‑67 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat < 1:894925‑M1/68‑68 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat < 2:1102537‑M1/68‑68 (MQ=255) | GGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGAT > NC_000913/1757023‑1757152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |