| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3927418 = | 19 (0.490) | 7 (0.220) | 5/106 | 2.4 | 30.1% | coding (264/993 nt) | asnA | asparagine synthetase A |
| ? | NC_000913 | 3927457 = | 17 (0.540) | coding (303/993 nt) | asnA | asparagine synthetase A | |||||
AGTTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGC > NC_000913/3927351‑3927482 | cattacgcgttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgg > 2:1327461‑M1/68‑68 (MQ=255) attacgcgttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcggg > 1:822001‑M1/67‑68 (MQ=255) ttacgcgttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgggg > 1:1435767‑M1/66‑68 (MQ=255) tacgcgttcccagtcccacttgtcaacatcgaccgagtgcaacggagaaagacggtcttcatcgGGGc > 2:658649‑M1/65‑68 (MQ=255) tacgcgttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGc > 2:187407‑M1/65‑68 (MQ=255) gttcccagtcccactggtcaacttagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAgg > 1:71349‑M1/60‑68 (MQ=255) gttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAgg > 1:597940‑M1/60‑68 (MQ=255) gttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAgg > 2:285142‑M1/60‑68 (MQ=255) gttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAgg > 1:18375‑M1/60‑68 (MQ=255) gTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGCAGG > 2:781348‑M1/1‑68 (MQ=255) gTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGG < 1:1225103‑M1/68‑1 (MQ=255) gTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGG > 1:968822‑M1/1‑68 (MQ=255) gTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGG > 1:1463690‑M1/1‑68 (MQ=255) gTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGG > 1:164715‑M1/1‑68 (MQ=255) gTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGG > 1:882637‑M1/1‑68 (MQ=255) gTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCATCACGACTTCAGCGCGTGCGAAGGGCT < 1:1380086‑M1/68‑1 (MQ=255) gTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCT < 2:391810‑M1/68‑1 (MQ=255) gTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCT < 2:1463685‑M1/68‑1 (MQ=255) tcattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGt < 1:33688/68‑1 (MQ=255) tcattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGt < 2:1454282/68‑1 (MQ=255) tcattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGt < 1:260214/68‑1 (MQ=255) cattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTa < 1:441005/68‑1 (MQ=255) cattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTa < 1:478554/68‑1 (MQ=255) attcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTac > 1:1451313/1‑68 (MQ=255) tcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTacgc > 1:1366851/1‑66 (MQ=255) tcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTacac > 1:349332/1‑68 (MQ=255) tcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTacac > 2:197308/1‑68 (MQ=255) cTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGca < 1:1411511/68‑1 (MQ=255) gCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTttcatgtgcgtg < 1:970951‑M1/68‑13 (MQ=255) gtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTACACGCACATg > 2:763419‑M1/44‑68 (MQ=255) gtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTACACGCACATg > 1:431089‑M1/44‑68 (MQ=255) cGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATg < 1:937815/68‑1 (MQ=255) tGGAAACGTCAGCCCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCAAATGAAaga < 1:518816‑M2/68‑4 (MQ=255) tGGAAACGTCAGACCTTAGGGCAACCCGACTTCAGCGCGGGCGGAGGGCTGTACACGCACATGAAagc < 2:759242‑M2/68‑4 (MQ=255) ggAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAagcc > 1:1296099‑M2/1‑64 (MQ=255) ccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCg < 2:161060‑M1/36‑1 (MQ=255) ccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGATGTACACGCACATGAAAGCGCTTCg < 1:1463904‑M1/36‑1 (MQ=255) cgagtgcaacggagaaagacggtcttcatcgGGGCGGAGGGCTGTACACGCACATGAAAGCCCTTCGc < 2:833014‑M1/37‑1 (MQ=255) tCAGACCTTAGGGCAACACGACTTCAGCGCGGGGGGAGGGCGttcatgtgcgtgtacagcccttcggc > 1:1282785‑M1/1‑42 (MQ=255) tCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTttcatgtgcgtgtacagcccttcgcc > 1:1284627‑M1/1‑42 (MQ=255) aGACCTTAGGGCAACTCGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTGCGcccc < 2:560885/68‑1 (MQ=255) aCCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTttcatgtgcgtgt < 1:1296518‑M1/51‑14 (MQ=255) aCCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTttcatgtgcgtgt > 2:1296514‑M1/1‑38 (MQ=255) aCCTTACGCCAACACGACTTCAGCGCCGTCGATGTTCTGTACACGCTCATGCCAGCCCTTCGCCCCGa < 2:1317876/68‑1 (MQ=255) acTTAGGGCAACAAGACTTCACCGCGGGCGAAGGGCGGTACACGCGCAAGAAAGCCCTTCGCCCCGAt > 2:364318/2‑68 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc > 1:1115705/1‑68 (MQ=255) aagacggtcttcatcgGGGCGAAGGGCTGTACACGCACAt < 2:893749‑M1/24‑1 (MQ=255) aagacggtcttcatcgGGGCGAAGGGCTGTACACGCACAt > 1:893754‑M1/17‑40 (MQ=255) aaCACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGt < 1:680624/68‑1 (MQ=255) acGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCtt < 2:1381366/68‑1 (MQ=255) gACTTCAGCGCTGGCTAATGGCTGCACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTtc < 2:1211742/68‑1 (MQ=255) cgcgGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGc > 1:1197298/1‑68 (MQ=255) | AGTTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGC > NC_000913/3927351‑3927482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |