New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	726474 =	11 (0.550)	3 (0.160)	3/122	1.8	22.8%	coding (563/2049 nt)	kdpB	potassium translocating ATPase, subunit B
	?	NC_000913	3621273 =	NA (NA)					coding (2082/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

TGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGAT  >  NC_000913/726407‑726541                                                                    |                                                                    ctctgcggtttcacacttcacggtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtga                                                                     <  2:351001‑M1/1‑1 (MQ=255)  tctgcggtttcacccttcacggtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgAc                                                                    >  2:191225‑M1/67‑68 (MQ=255)   ctgcggtttcacccttcacggtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgAcc                                                                   >  1:569485‑M1/66‑68 (MQ=255)    gcCTTCCACCATCGCGATCATACGATCCAGAAATGTCTCGACGGGGTTAACGCTACACTCAATCAcaa                                                                  >  2:626381/1‑66 (MQ=255)       ggtttcacccttcacggtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgAccagcc                                                               <  1:694648‑M1/7‑1 (MQ=255)              aTCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGt                                                            >  2:739595/1‑64 (MQ=255)              aTCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGt                                                            <  1:739594/64‑1 (MQ=255)              aTCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCaga                                                        >  2:20682/1‑68 (MQ=255)                     cggtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgACCAGCCAGTCAGAAAGAATa                                                 >  1:691969‑M1/48‑68 (MQ=255)                     cggtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgACCAGCCAGTCAGAAAGAATa                                                 <  2:691970‑M1/21‑1 (MQ=255)                                   aaTGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGt                                   >  1:7266/1‑68 (MQ=255)                                                      cGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAACTcgccg                >  2:491744/1‑68 (MQ=255)                                                      cGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATcgccg                >  2:492609/1‑68 (MQ=255)                                                            acTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGAt          <  2:630612/68‑1 (MQ=255)                                                              tCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTc        <  2:406193/68‑1 (MQ=255)                                                                 aTCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACg     <  2:121149/68‑1 (MQ=255)                                                                 aTCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACg     >  2:738104/1‑68 (MQ=255)                                                                    ACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGAt          >  2:684423‑M1/1‑60 (MQ=255)                                                                    ACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGAt          <  1:684422‑M1/60‑1 (MQ=255)                                                                    ACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGAt  <  2:450079‑M1/68‑1 (MQ=255)                                                                    |                                                                    TGCGCCTTCCACCATCGCGATCATCCGATCCAGAAATGTCTCGCCGGGGTTAACGCTACACTCAATCACCAGCCAGTCAGAAAGAATACGCGTGCCGCCGGTGACGGAGGCAAAATCGCCGCCGGATTCACGGAT  >  NC_000913/726407‑726541

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.