| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 715563 | 22 (1.100) | 5 (0.300) | 4/112 | 1.4 | 24.0% | coding (152/495 nt) | ybfP | lipoprotein |
| ? | NC_000913 | = 715719 | 13 (0.770) | coding (308/495 nt) | ybfP | lipoprotein | |||||
AACGAAAAAGAACTTACTTATCTTCATAATATGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCA > NC_000913/715652‑715784 | aaCGAAAAAGAACTTACTTATCTTCATAATATGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTg < 2:219888/68‑1 (MQ=255) aaaGAACTTACTTATCTTCATAATATGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGgcaatg > 1:364225‑M2/1‑62 (MQ=255) cttaTCTTCATAATATGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCa < 1:698371/68‑1 (MQ=255) atGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGgcaatgctacccgttaatcctctggtttta < 2:745261‑M2/68‑31 (MQ=255) atGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGgcaatg > 1:152888‑M2/1‑38 (MQ=255) atGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGgcaatg < 2:152888‑M2/44‑7 (MQ=255) atGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGt > 2:346594/1‑68 (MQ=255) tCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCTTTTTTTATGCGGGTTTg > 2:451894/1‑68 (MQ=255) acaAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAgg > 1:673118/1‑68 (MQ=255) aaaaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAg > 2:294091/1‑68 (MQ=255) aaaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGc < 1:159338/68‑1 (MQ=255) aaaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGc < 1:645189/68‑1 (MQ=255) aaGGTCGGTTTAAATCCCGGTTGgcaatgctacccgttaatcctctggttttatctttaggggtcagt > 1:745260‑M2/1‑23 (MQ=255) gacGGATTAAATCCAGGTTGGCAATGATACACATCATATTTTATGCGGGATTTCCAGGGCAAGCCCgg > 2:355121/3‑68 (MQ=255) ttAAATCCCGGTTGgcaatgctacccgttaatcctctggttttatctttaggggtcagtaaccagtcg < 2:300853‑M2/68‑55 (MQ=255) ttAAATCCCGGTTGgcaatgctacccgttaatcctctggttttatctttaggggtcagtaaccagtcg < 1:410943‑M2/68‑55 (MQ=255) ttAAATCCCGGTTGGCGATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCg > 1:558872/1‑68 (MQ=255) ttAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCg > 2:307891/1‑68 (MQ=255) aTCCCGGTTGgcaatgctacccgttaatcctctggttttatctttaggggtcagtaaccagtcgccag > 1:300853‑M2/1‑10 (MQ=255) tCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGa > 1:752982/1‑68 (MQ=255) gTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCTGGTCATGCCCTGCACTCGACCGATAGTc < 1:355120/68‑1 (MQ=255) ttGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCa > 1:625457/1‑68 (MQ=255) | AACGAAAAAGAACTTACTTATCTTCATAATATGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCA > NC_000913/715652‑715784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |