| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2353082 = | 19 (0.950) | 3 (0.170) | 3/116 | 1.7 | 14.1% | coding (436/1629 nt) | glpA | anaerobic sn‑glycerol‑3‑phosphate dehydrogenase, large FAD/NAD(P)‑binding subunit |
| ? | NC_000913 | 2353145 = | 20 (1.140) | coding (499/1629 nt) | glpA | anaerobic sn‑glycerol‑3‑phosphate dehydrogenase, large FAD/NAD(P)‑binding subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GATGGCACCGTTGATCCATTTCGTCTGACCGCAGCAAACATGCTGGATGCCAAAGAACACGGTGCCGTTATCCTTACCGCTCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTG > NC_000913/2353079‑2353211 | gATGGCACCGTTGATCCATTTCGTCTGACCGCAGCAAACATGCTGGATGCCAAAGAACACGGTGCCGt < 2:393944/68‑1 (MQ=255) tGGCACCGTTGATCCATTTCGTCTGACCGCAGCAAACATGCTGGATGCCAAAGAACACGGTGCCGTTa < 2:410844/68‑1 (MQ=255) ttggcatccagcatgtttgctgcggtcagacgaaatggatcaacggtgccGTTATCCTTACCGCTCAt > 1:42935‑M2/51‑68 (MQ=255) cATTTCGTCTGACCGCAGCAAACATGCTGGATGCCAAAGAACACGGTGCCGTTATCCTTACCGCTCAt > 1:169548/1‑68 (MQ=255) cATTTCGTCTGACCGCAGCAAACATGCTGGATGCCAAAGAACACGGTGCCGTTATCCTTACCGCTCAt > 2:500643/1‑68 (MQ=255) atCGTCTGACCGCAGCAAACATGCAGGATGCCAAAGAACCCGGTGCCGTTAACCTTACCGATCATGaa > 1:653267/2‑68 (MQ=255) gTCTGACCGCAGCAAACATGCTGGATGCCAAAGAACACGGTGCCGTTATCCTTACCGCTCATGAAGTc < 2:727580/68‑1 (MQ=255) gTCTGACCGCAGCAAACATGCTGGATGCCAAAGAACACGGTGCCGTTATCCTTACCGCTCATGAAGTc > 2:411794/1‑68 (MQ=255) gTCTGACCGCAGCAAACATGCTGGATGCCAAAGAACACGGTGCCGTTATCCTTACCGCTCATGAAGTc > 2:403676/1‑68 (MQ=255) aCCGCAGCAAACATGCTGGATGCCAAAGAACACGGTGCCGTTATCCTTACCGCTCATGAAGTCACggg < 2:731198/68‑1 (MQ=255) gcaAACATGCTGGATGCCAAAGAACACGGTGCCGTTATCCTTACCGCTCATGAAGTCACGGGGCTGAt < 2:300988/68‑1 (MQ=255) ctgcggtcagacgaaatggatcaacggtgccGTTATCCTTACCGCTCATGAAGTCACGGGGCTGATTc < 2:42935‑M2/37‑1 (MQ=255) tGCTGGATGCCAAAGAACACGGTGCCGTTATCCTTACCGCTCATGAAGTCACGGGGCTGATTCGTGaa > 1:603574/1‑68 (MQ=255) gCTGGATGCAAAAGAACACGGTGCCGTTATCCTTACAGCTCATGAAGTCACGGGGCTGATTCGTGAAg > 2:200607/1‑68 (MQ=255) aaaGTACACGGTGCCGTTATCCTTACCGCTCATGAAGTCACTTGGCTGATTCGTGTAGTCGCGACGgt < 2:653268/68‑1 (MQ=255) aaaGAACTCGGTGCCGTTATCCTTACCGCTCTTGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGgt < 2:349657/68‑1 (MQ=255) aaaGAACACGGTGCCGTTATCCTTACCGCTCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGgt > 2:33406/1‑68 (MQ=255) aaaGAACACGGTGCCGTTATCCTTACCGCTCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGgt > 2:528713/1‑68 (MQ=255) aaaGAACACGGTGCCGTTATCCTTACCGCTCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGgt > 1:630875/1‑68 (MQ=255) aGAACACGGTGCCGTTATCCTTACCGCTCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGgtgt > 2:735320/1‑68 (MQ=255) caacggtgccGTTATCCTTACCGCTCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCg > 1:161715‑M2/11‑68 (MQ=255) acacGGTGCCGTTATCCTTACCGCTCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCg > 2:740492/1‑68 (MQ=255) acacGGTGCCGTTATCCTTACCGCTCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCg > 1:49635/1‑68 (MQ=255) cGTTATCCTTACCGCTCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCgtg < 1:401811‑M2/67‑1 (MQ=255) | GATGGCACCGTTGATCCATTTCGTCTGACCGCAGCAAACATGCTGGATGCCAAAGAACACGGTGCCGTTATCCTTACCGCTCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTG > NC_000913/2353079‑2353211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |